Detailed information of PE_Scaf11091_1.5 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf11091_1.5DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTLSuperscaffold51985733219891423-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01119DNA_mis_repairDNA mismatch repair protein, C-terminal domainFamilyInterproscan
PF08676MutL_CMutL C terminal dimerisation domainDomainInterproscan
PF13589HATPase_c_3Histidine kinase-, DNA gyrase B-, and HSP90-like ATPaseDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR002099FamilyDNA mismatch repair protein MutL/Mlh/PMSInterproscan
IPR013507DomainDNA mismatch repair protein, S5 domain 2-likeInterproscan
IPR014721Homologous_superfamilySmall ribosomal subunit protein uS5 domain 2-type fold, subgroupInterproscan
IPR014762Conserved_siteDNA mismatch repair, conserved siteInterproscan
IPR014790DomainMutL, C-terminal, dimerisationInterproscan
IPR020568Homologous_superfamilyRibosomal protein uS5 domain 2-type superfamilyInterproscan
IPR036890Homologous_superfamilyHistidine kinase/HSP90-like ATPase superfamilyInterproscan
IPR037198Homologous_superfamilyMutL, C-terminal domain superfamilyInterproscan
IPR038973FamilyDNA mismatch repair protein MutL/Mlh/Pms-likeInterproscan
IPR042120Homologous_superfamilyMutL, C-terminal domain, dimerisation subdomainInterproscan
IPR042121Homologous_superfamilyMutL, C-terminal domain, regulatory subdomainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR10073DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTLInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006298Biological Processmismatch repairInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0030983Molecular Functionmismatched DNA bindingInterproscan
GO:0032300Cellular Componentmismatch repair complexInterproscan
GO:0032389Cellular ComponentMutLalpha complexInterproscan
GO:0140664Molecular FunctionATP-dependent DNA damage sensor activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf11091_1.5 global RNA-seq network
TOP