Detailed information of PE_Scaf11087_12.2 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf11087_12.2ATP-DEPENDENT CLP PROTEASESuperscaffold134139410741414879-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
--

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00023AnkAnkyrin repeatRepeatInterproscan
PF07724AAA_2AAA domain (Cdc48 subfamily)DomainInterproscan
PF10431ClpB_D2-smallC-terminal, D2-small domain, of ClpB protein DomainInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001270FamilyClpA/B familyInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR003959DomainATPase, AAA-type, coreInterproscan
IPR019489DomainClp ATPase, C-terminalInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR050130FamilyATP-dependent Clp protease/Chaperone ClpA/ClpBInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR11638ATP-DEPENDENT CLP PROTEASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0034605Biological Processcellular response to heatInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

Expression pattern
 1. Expression trend for PE_Scaf11087_12.2 global RNA-seq network
TOP