Detailed information of PE_Scaf11016_2.2 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf11016_2.2DNA TOPOISOMERASE/GYRASESuperscaffold65537887255404161-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00204DNA_gyraseBDNA gyrase BDomainInterproscan
PF00521DNA_topoisoIVDNA gyrase/topoisomerase IV, subunit AFamilyInterproscan
PF01751ToprimToprim domainFamilyInterproscan
PF02518HATPase_cHistidine kinase-, DNA gyrase B-, and HSP90-like ATPaseDomainInterproscan
PF16898TOPRIM_CC-terminal associated domain of TOPRIMFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001154FamilyDNA topoisomerase II, eukaryotic-typeInterproscan
IPR001241FamilyDNA topoisomerase, type IIAInterproscan
IPR002205DomainDNA topoisomerase, type IIA, domain AInterproscan
IPR003594DomainHistidine kinase/HSP90-like ATPaseInterproscan
IPR006171DomainTOPRIM domainInterproscan
IPR013506DomainDNA topoisomerase, type IIA, subunit B, domain 2Interproscan
IPR013758Homologous_superfamilyDNA topoisomerase, type IIA, domain A, alpha-betaInterproscan
IPR013759Homologous_superfamilyDNA topoisomerase, type IIA, subunit B, C-terminalInterproscan
IPR013760Homologous_superfamilyDNA topoisomerase, type IIA-like domain superfamilyInterproscan
IPR014721Homologous_superfamilySmall ribosomal subunit protein uS5 domain 2-type fold, subgroupInterproscan
IPR018522Conserved_siteDNA topoisomerase, type IIA, conserved siteInterproscan
IPR020568Homologous_superfamilyRibosomal protein uS5 domain 2-type superfamilyInterproscan
IPR031660DomainC-terminal associated domain of TOPRIMInterproscan
IPR034157DomainDNA topoisomerase 2, TOPRIM domainInterproscan
IPR036890Homologous_superfamilyHistidine kinase/HSP90-like ATPase superfamilyInterproscan
IPR050634FamilyDNA Topoisomerase II EnzymeInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR10169DNA TOPOISOMERASE/GYRASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000712Biological Processresolution of meiotic recombination intermediatesInterproscan
GO:0000819Biological Processsister chromatid segregationInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003918Molecular FunctionDNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006259Biological ProcessDNA metabolic processInterproscan
GO:0006265Biological ProcessDNA topological changeInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf11016_2.2 global RNA-seq network
TOP