Detailed information of PE_Scaf10856_0.8 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf10856_0.8ZINC FINGER PROTEIN 294Superscaffold121486807214886141+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|PHD

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13639zf-RING_2Ring finger domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001841DomainZinc finger, RING-typeInterproscan
IPR011016DomainZinc finger, RING-CH-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR039795FamilyE3 ubiquitin-protein ligase listerinInterproscan
IPR039804DomainListerin, zinc finger, RING-typeInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR12389ZINC FINGER PROTEIN 294Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005829Cellular ComponentcytosolInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0043023Molecular Functionribosomal large subunit bindingInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0072344Biological Processrescue of stalled ribosomeInterproscan
GO:1990112Cellular ComponentRQC complexInterproscan
GO:1990116Biological Processribosome-associated ubiquitin-dependent protein catabolic processInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf10856_0.8 global RNA-seq network
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