Detailed information of PE_Scaf107_2.5 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf107_2.5DNA-REPAIR PROTEIN XRCC1Superscaffold104771803447740809-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00533BRCTBRCA1 C Terminus (BRCT) domainFamilyInterproscan
PF01834XRCC1_NXRCC1 N terminal domainDomainInterproscan
PF16589BRCT_2BRCT domain, a BRCA1 C-terminus domainFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001357DomainBRCT domainInterproscan
IPR002706DomainDNA-repair protein Xrcc1, N-terminalInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR036420Homologous_superfamilyBRCT domain superfamilyInterproscan
IPR045080DomainXRCC1, first (central) BRCT domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR11370DNA-REPAIR PROTEIN XRCC1Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000012Biological Processsingle strand break repairInterproscan
GO:0003684Molecular Functiondamaged DNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006284Biological Processbase-excision repairInterproscan
GO:0006303Biological Processdouble-strand break repair via nonhomologous end joiningInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf107_2.5 global RNA-seq network
TOP