Detailed information of PE_Scaf106_5.6 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf106_5.6LD33695PSuperscaffold105044020450471971-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02188GoLocoGoLoco motifMotifInterproscan
PF07721TPR_4Tetratricopeptide repeatRepeatInterproscan
PF13176TPR_7Tetratricopeptide repeatRepeatInterproscan
PF13424TPR_12Tetratricopeptide repeatRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR003109Conserved_siteGoLoco motifInterproscan
IPR011717RepeatTetratricopeptide TPR-4Interproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR052386FamilyG-protein-signaling modulatorInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR45954LD33695PInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000132Biological Processestablishment of mitotic spindle orientationInterproscan
GO:0001965Molecular FunctionG-protein alpha-subunit bindingInterproscan
GO:0005092Molecular FunctionGDP-dissociation inhibitor activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005938Cellular Componentcell cortexInterproscan
GO:0030695Molecular FunctionGTPase regulator activityInterproscan
GO:0042802Molecular Functionidentical protein bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf106_5.6 global RNA-seq network
TOP