| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| PE_Scaf1040_6.4 | UBX DOMAIN CONTAINING PROTEIN | Superscaffold12 | 40246305 | 40276894 | + |
| CDS | |||||
| PE_Scaf1040_6.4 | |||||
| Transcript |
| PE_Scaf1040_6.4 |
| Protein |
| PE_Scaf1040_6.4 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | ULD|UFD|UBX |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00789 | UBX | UBX domain | Domain | Interproscan |
| PF08059 | SEP | SEP domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001012 | Domain | UBX domain | Interproscan |
| IPR012989 | Domain | SEP domain | Interproscan |
| IPR029071 | Homologous_superfamily | Ubiquitin-like domain superfamily | Interproscan |
| IPR036241 | Homologous_superfamily | NSFL1 cofactor p47, SEP domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR23333 | UBX DOMAIN CONTAINING PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0043130 | Molecular Function | ubiquitin binding | Interproscan |
| GO:0043161 | Biological Process | proteasome-mediated ubiquitin-dependent protein catabolic process | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for PE_Scaf1040_6.4 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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