Detailed information of PE_Scaf10387_4.5 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf10387_4.5TBP-1 INTERACTING PROTEINSuperscaffold19600890396039690-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07106TBPIPTBPIP/Hop2 winged helix domainDomainInterproscan
PF18517LZ3wCHLeucine zipper with capping helix domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR010776DomainHomologous-pairing protein 2, winged helix domainInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR040661DomainLeucine zipper with capping helix domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR15938TBP-1 INTERACTING PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000709Biological Processmeiotic joint molecule formationInterproscan
GO:0000794Cellular Componentcondensed nuclear chromosomeInterproscan
GO:0003690Molecular Functiondouble-stranded DNA bindingInterproscan
GO:0007129Biological Processhomologous chromosome pairing at meiosisInterproscan
GO:0010774Biological Processmeiotic strand invasion involved in reciprocal meiotic recombinationInterproscan
GO:0120230Molecular Functionrecombinase activator activityInterproscan
GO:0120231Cellular ComponentDNA recombinase auxiliary factor complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf10387_4.5 global RNA-seq network
TOP