Gene detail

Detailed information of PE_Scaf10325_0.0 in Paraescarpia echinospica Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
PE_Scaf10325_0.0	G-PROTEIN COUPLED RECEPTOR	Superscaffold2	78805088	78810168	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

PE_Scaf10325_0.0

TAAACACTGCCTCGGTCGGCGCTGGCATTCCAGGTAGGTTCAACGGCTGCCATGTAGAATACACTAATTAGTTAATTAGCTGGGTTGCAGAACGGATGTGTTGCTTCCCTGTAGCTTCACGTGTCGCTCCACCTACCCCGGCGTAATGTCACCCATAATGTCACGCGTAATGTCACCCATAATGTCACGCGTCATGTCACTCGTACTGCCACTCGTAATGTCACACGTAATGTCACGCGTCATGCCACCAGTAATATCACCTATAATGCCACCCGTAATGTCACCCCTAATGCCACGCATCATGTCACCCGTAATGCCACTCGTAATGTCACCCGTAATGTCACGCATAATGCCACCCGTAATGCCACGCATAATGCCACCCGTAATGTCACCGGTAATGTTTGTCGGCAGATAGTCTGACAACATATTAATACAATGATAATAATTATTATTACCCGAAGTACGTGGATGTTGTCTGCCACCACAGGTAAAATAGACGAGCACAAAGGAAACAAGTCCAATATCAGGCTAAGAAAACAGACGATACAAAAACACATATAAAACACTTCACATATAATAGTATCATTGCTGTACAGACAATGACATCACACAAATGGCCGCATCACAGATAATGAAAGGTCACATGTGTTTATTCTGCATTATAAATTAGGCTAGCATGTGGCAGGAATGTTTTCCTGCCTCACATACACGCATGCATACACACATACACCTTTCAACACGACCCATTATACCACCAAAGCCCACCAAACCAGTAAAGTCACCCGTCCATCTACACAGACCCGACTATCTGCCTATCATCCCAACACAAACCCGACTATCTGCCTATCATCCCAACATTCTTATAAATACTGTTGCTTCGTGTCACTCAGCGATTATGTTTTTTCCACGCACAGTGTTTTTCTTGCAAATAGCTTATCAGCAGAATGCGACGAAAACATATCTTACGCTGGGTCATTCTGTGTACACGCGCAATAAATCGGTTTGGTTTAGAAGTTACTGCAGCAATACGCGTTCTTTTTACGGTCAGTGAGTGATCACGCGCGGCGTCGCTAACTATTAATTGTAACCGTTCTGTGTCACGGGCCGGATTATTTTACGCAGCTGCATGAAAGTAATGAACTCATTCGGTTTAAATGCGGCGTACAACTGTAACAGATGCCGCGTGTTTGGATGTCGACGTCACCCGTATTAGCCAATATAGCCGTGGTTGTACTTTGTCAATATAGTAGTGGCTCAACTTAGCCAATATATCGGTAGTCATATCATTGTATCATTTATTTATTATTATTATATATATATATATATATATATATATATACATATATGTGCACAAGCACGCACACATTCTCATGCAAATACACGTGTTTGTGTAAGAATATATATTTTTCTATCGGTTTAATTGACCATATAGGATGGCGTGTCGTCACATTCTGGTCAGAGGACCATGGTGACCATCTAGTCAAAATGAACCTGTAGTCTCATTGTGGTAAGAGGACCATGGTTGCCACCCAGTCTAAATGGACCAGTCGTATCAATTTGGTCAGAGGACCGTGGTTGCCATATAGTCTAAATTGATCTGTCATCAGATAGTGGTCCGAGGACCATGGTTGTCATGCAGTCTAAATTGATATGTTATCAGATGGTCCGATGAGCATGGTTGCGTGACCACATCCGCCAGCTGCTATCATTAACGGAACCATTGATTGACCTGCTACATAACGACACTGCGCTGTTCTGATCGATTCTCGGTCATCTCTTGATTGCGTGTCGCAGTCGGTGAATTGACCAGCCAGCAGGGGATATGACGTCACTACAAGCAGACCTGTTAGTAGAGGTCGCCAACAGTGACGTTATTGATGATATCGGTGGTAACGTCACTGCAGGGAGATGTGTAATTGTCAACTACACGTGACGTCACTACACGAAGATGCGTAGTTGTATCCGACAGTGACGACATTGTAAGAGATAAAAAATATGTTGCCTAACCAAATCGGTGATAAATCGTAAAGGTACTACGTGTTTCTATATTCCTTCTGTGTGTGTCTCTCGTATGCATGCAGACTGGTACTCTCGAGTTATTCCTGCACCACTATTTCCCCTTCAGTATTTCTCCTGATTAACCCGGTCATTTGATTGTCTCTTTAATGTGGGCACTGGAACGGCTCTGAATCAATCATACGGTTCCCTCGATGACGACAGTAATGAGCGCCTTACATGTGCTAAGTATGAAGACAGCGAGCCAGTGTAGATACTTCAATAACTGTGTTGTGTCACTCTTGCGTTAGTAACTAGTAGTTGAATGCGTTCTATAAGTGGAGAGACTCGCAAGGAACGTGGACAGCTAATTGACGTCAATGCGGGCTGTGTTAATATATTTTAATTAACATTGATGTCCATTGCATTGCGAGGTACTGTCGATAGATGCAGGGCAGTTAACGTTTCCTCGGTTTGATTCAATCGGATGTAAACATGTTATTGCCAAATTGATTATTGTAATCCGACTCAGTCGTATAACGCGAACTATGGCCTCGGCTGCACATCAACTAACGCGACACATACCAAGTGAAATTAGTTGCCGCGTGAGAGTATGAATTTCTACGATGTTAGGCCTGCCTCACTGAAGACTGTCCGCGTCATCAGTCTCAACAGCAATGACGCCACAGCACTGTCACGCGTAGCATTGTGGTATAACGCACAGGACATCAACTGTGCAACGCAGATTAAAGGCCGGGATACACTGGGATTTTTCTCCCGACCCGACCCAACCCGACCAGACCAGACCAAACCACACCAGACTCCCTCCGACTACAGTGAATCTACTACACCGACTGACACCGACTGCGCTGTACTCTAAACCGGCGTGACATCACAATCACGTCTGGTTGAGTGTCTTTTGAGCCACTTCACATGCCTCTACTAATTTGCATATACGTGGAAATTGTATTATCCCAGCCTCACAACTTTGACAATTCTCTTAGCGGACATTATTATTAATACGATGGTGTAATTATAATATTACAAAACTAATTATTTTTGGTTTGTCACTGAAAACATGAAAAGTGGCTCATAGATCACAACCTTCCCCTGCGCATCACACAGTGTGCATTGTGATTGTCTTAGACCTCGGTAGTTGGCGTTGACGTGACGCCACTTTTATTGACGCCTACTACCAGTCAATACGATGCCACACCATTAATTATGGCCACGTTCGATTTCCGAGGAAATAGCACGACAAACGTTCCACCAATCTGATCCTTTACTCTTATTTATAACAAATGCTACTATTTTAAAAGGTTTCATAGCAAATGCACTTTTAAGCAATCAAACATGTGAAATGGCCATTCATGACATGACGGGCGACAATAGATCACGCCAGCAATCATGTGATTTACGTAATTTATAAAAAATCATATGTCACATTCAAGGACGCACCCCTAAGTTGAGCAAAGTACACCCCCTTTTAAATTACAATAGAAATGAGCTGAATTTGTAATTATTCATCATATTTATATAATGGCTGTAAATAAATAGGGAAGATAGCACAACGTTGGACATTAATCAGTTCAACGTTCCAACAAATTAAACAATATGTATAAATATGCATTTAAAAATAGCATTCTATGTTTTCTATTAAATACAGTACGCCGGGGTGCGCTTTGCCCACATGACGAAATTAGCATAATGTGCAGGACTATCACTAAAATTGAATTTCTATTTTTTGTATTTGTTATGTACTTGCTACGTTTCTGTAATTATAATAATGTTTAGATAAGATAGTGTTTATGTGAAGGTGTCAACCGTTTCTGCCTTAACGGAAAATAAGTAGATCAAAAGGTCGCTAAAGGTGGGGGCGCCATTTCTTTTTAAATCAATACTAAACATGTGGTGTTCGTTTCAGGTGCGATGACGCCTAGTCACGACTGTGTCACACCGTCGTGACGACATCTGCCCACAAGGCGTGACGGCATATGTCTACTGGCACGATGAATGTGACTGGTTGCAGCGATTGTCGTCAAGTGACTTTCGCGGATGTTTTGTATGTGACGGAAGACGTCATGTCTGACAAGACCGCGGGTGTCACCTCCAACACAACCTTTGACCTGACCCAGGTTCTCGGACCTCGGCGTGAAGCTCTCTACAAGGTCATTCCAATGACGGTGGTGTATTGCGTCATCTTCGTGACGGGTGTCGTCGGCAACGTGTGCACGTGCCTCGTGATCAGACGGACCAAGTACATGCAGACCGTTACCAACTACTACTTGTTCAACCTGGCCGTGGCGGACCTGCTGGTCTTGCTGCTGGGTCTGCCTCAGGAAACCTACTCGTTCTGGTCCGCCTACCCGTGGGTGTTCGGCGAGACGTTCTGCGTGCTGCGGACCATGGCGGCGGAGACATCAACCTATGCTTCCATCCTCACTATCACCGCCTTCACCGTCGAGAGATACGTCGCTATATGTCACCTGATGCTCACCCAGACAGGGTCGAGTCTCCGGCGGGCCGTCAAGGTGATAGTCCTGCTGTGGGTCGTGTCCGCGATTTGCTCCGTGCCCATGGTCGTCCAGTTCGGACTCGTCTACGTCACCAACGACACGGGTACACCAGTACCGGAGTCGGTGACGTGCAACATCAAGCCTGACCGCTACCTGCGGCACGCCTTCGAGACGTCTACCTTCCTCTTCTTCCTCGCGCCCATGACCGTCATCACGGTCCTTTACGCCCTCATCGGAGTCGCCATCCGCCGGTCAACGCTCTCCCGCAGCTCGTCCGACACGTCAACACAGAGCGGGCCGAGGCGAGGGGCCGAGGCTCGGACACTGCAGCAGGCGCGGGCACGCAGAGCCGTGCTCAAGATGCTGGGTGAGTCTCACGCACGCACGCACACATGCATGCACGCACCGCACCCGTATACACTCACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAGATACATGTACACGTGCCGCAAGCACACATGTTGAGTTGA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00001	7tm_1	7 transmembrane receptor (rhodopsin family)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000276	Family	G protein-coupled receptor, rhodopsin-like	Interproscan
IPR005390	Family	Neuromedin U receptor	Interproscan
IPR017452	Domain	GPCR, rhodopsin-like, 7TM	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24243	G-PROTEIN COUPLED RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0001607	Molecular Function	neuromedin U receptor activity	Interproscan
GO:0004930	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0007186	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0007218	Biological Process	neuropeptide signaling pathway	Interproscan
GO:0008188	Molecular Function	neuropeptide receptor activity	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for PE_Scaf10325_0.0 global RNA-seq network