Detailed information of PE_Scaf10321_3.19 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf10321_3.19LD33804PSuperscaffold1877673891424+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Transcription Factors FamilyZBTB
Ubiquitin FamilyE3|E3 adaptor Cullin RING|BTB

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00651BTBBTB/POZ domainDomainInterproscan
PF01344Kelch_1Kelch motifRepeatInterproscan
PF02966DIM1Mitosis protein DIM1DomainInterproscan
PF07707BACKBTB And C-terminal KelchDomainInterproscan
PF13964Kelch_6Kelch motifRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000210DomainBTB/POZ domainInterproscan
IPR004123FamilyDim1 familyInterproscan
IPR006652RepeatKelch repeat type 1Interproscan
IPR011333Homologous_superfamilySKP1/BTB/POZ domain superfamilyInterproscan
IPR011705DomainBTB/Kelch-associatedInterproscan
IPR015915Homologous_superfamilyKelch-type beta propellerInterproscan
IPR017096FamilyBTB-kelch proteinInterproscan
IPR036249Homologous_superfamilyThioredoxin-like superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR45632LD33804PInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0046540Cellular ComponentU4/U6 x U5 tri-snRNP complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf10321_3.19 global RNA-seq network
TOP