Gene detail

Detailed information of PE_Scaf10305_19.3 in Paraescarpia echinospica Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
PE_Scaf10305_19.3	NADPH OXIDASE	Superscaffold2	9382912	9391681	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

PE_Scaf10305_19.3

TCGCGATGGACGAGACGACGGAATGGCTGGGCAGGGCAAAGACGCAGCTCGTGCAGGCGGCGGAGACTGAGACGGTCCTCATCGACGTGGACGGCTTCAAAACAGCGCTCAAACCCGCCGACGTAAGTGGACTAATATTAATCGAAAGTAAATAGAAACTCGGCCGAATGAAAAGTAATTTGAAATGTATCTACATAATTGAGCCTACGTTGAATGTGTAGCAACTGTCTTTATGCTACGTATTGATAGCGATGTCAAGCCGACTCCAGTGGTATAATATCTACACAGTCATGTTCTGTCAGTCAAGTGGCGTGTGTGTGTTCGAAAGCGCGCGCGTGCGTGCATGTCTGGGTGTGTGCGTGTCTGAATATCTGAGTGTCTGCGTGTGTGTGCGCGCGCATGTGTGTTTGTATGTCATTGTGTTTGCGTTTACGAATGTCCGTGTAAGTTTATGTCCTTCATTTAGGGTAGGGTGGGGCATGGAGCCCCCCTTAAGGGAAAATGGGCATATTTAAGCATACAGTGAAAATGTTGAGGTTTTTGCGCTTGCACACGATTGCGGGGTACCTATTCCATGTTTCATCAAAGGCATTCTGTCATCTGACGGCACTAACTGTTATGATCGTCAATTAAAAAAAATTCCACAGGAGGCGTCTTGCCCCATACGTGGGGCAAGACGCCCTTTAGTGTGGGGCAACCGGCCCCCAGGGGGCGTCTTGCCCCAATGAGAAATTGTTGTGAAACAAACATAAATTTAATCTGCAAAATGCGTTGAATAATTTCAAATAAGAAATACGAACTTTATTAAAGCATATTAAACGACATCAGGCAACAGATGAACAGATGGCACATAATGCACAGTCAGTCGCTCTCCGATTCACAGTTGGGACACGTGAGAAAGGCCTGTCCCGCAGTCCAATCTTCGTGGGCCCATTTCTTGCACAGTTGACATTGCACCCACACCTCTCGTGATCTGCTATCTTTGAATGGCTCTCCGCATATAATGCAGGGCCATTCTTCCTCCTCGCTACTGGAGCTCACGCGCCTTTTCTTTGCTGTGTGTCTCTTCACTTCTGTCGCCAGGGACTTCTTCTTGAGCTTGGGTATGCGTTCTTTCTTCGCCTGCTGCATAGCCAACTTGTTCTTATGCGTCGTCGATGTCAGAACAGTGGCACACTCGGCAATATGCGATCTTGCACGTGGACGTGATATCTTTAGCAACGGAGATAGCTGCTTTATCAGCTCCTTAACGGTCGACACTCCTGCGGACGCGGTCGTTGGCGGGCCAGCAGTGGGCGGTGTCGGCCCAGCAGTGGACGGTGGCGGGCCAGCAGTGGACGATGGCGGGCCAGCAGTGGACAATTGTACTTTAGGGCGATTGAAACCGACAGCCCTTGCGGTGTTCGTACCCTGAGGCTGCCGAATAGCCAGGTCAGGGTGGCGCTTGAAGAAGCCGAGAAGCCAGTCTCGGCCGGCCATCTTTGTTTCGGCGTTGAACGTGTGCGCAAGCTCCAGCTTCACCGCGAGATCGTACGCGAGGCGCCTGACGTCCACGGTCGTCAAGCCGTACAAGCACTTCTCCATATACGCGATGTGTTCGCGCAGCGTGCGTTTCACGTCAGCCGATAGTACTAGTTGCCTTGGGCCGAGAGATAACGATCCCACAGTGGCGACTTTCTTGTTTCGGTGTCTTCGCAGCGTCCTGGCCGGAATGCCAAAACGCCGACTGACAGCCTTCATAGGCTGATTCTCCAGCGCTGCCAGATTCAACACATCGTCCCCACAGGCACCCCGTTCCGACTTGCGCTTGTACGTGCGGACCACTTCTACAGAAGAAAATATTAGTCAGTAGATGTTCAATCTATCATAGACCTATTGCAAATTTGCATTCAAACACATGCCGTATTTATTATTTATTTATTTATGCCTATTTATTTATATATATATATATATTTTTTTTTTAAACGTATTTATACAGGGTAGGCTAGTGCATTCAGATTAAAATACCGTTTTTCATTGTAGCCCTGTGCTTATACATAATTTATGGAAAAAATACAGGAATAAAAAAGCAATATATATAAATACCATGTTGCAAATACACAGACAATAAAATATGACAATTAATATAACAATTACATCATAATATCATGCAATAATTATTGGTAATATAGAATGATATAAAACATAATATACAAATACTATAAATAAAATAATATTTAATTGTAGCTCTAAGACTAGGCCTTGCACGTTAGCCTATGTTGCATGTGTAAAACAAACAATTAAAAAACGTGGGGTAAGACGCCCCTCAAGGGGCAAGAAGCCCCCCCCCCGGGGCGTCGTGTCCCACGTCGTTGGGGGCGTCTTGCCCCCAATAGGTTCCATGCAGACATGTGCCGATGGTCAAATTACATTTAATTATCGCCCGTTTTGCATGGTAATAATTGAAACTACTGACATAAACGATGCACAAAGTAACGACTATGTGATATCGCACGTAATATCTGTCTCATCATACATCTAGTATGTAACATTTTAACATTAAACAAGCCTAAAAACTTCAAATTCACTTTTTGTTACTCACCGTTGTTTTAGCGTTCTTGCGCGTTCGGACGCAATGAATGCTAGGTGGCAGCATTGTTTTCATCCACCAGAGACAGGCAGCAAACGATCGAAATATTGAAATACCCAAGGGGCGTCTTACCTCGAGGGGCTTCTTATCCCACCCTACCCTATACATAATTGTTTTCCTCTGTTTACCTTTAGCAATGTCAAAGATCTACTTTTGTTTTGGGAACACTTTATTCCTAATATGTTTTTCTAATGTCCAACGTAACCTAACTGTCCCAGATCATTGGAGACGTCATGCGGGTTATGTTGTTAAACAAACTTAAAGCATTTCTGGTAGAAAGCAAATCGACGTATATTTTATTGTATAGGCCTATCGCACCTTAAGTCTACGTACATGTTAACAGAATTCAACGAAAGTAACGGCGTCTTTACCCGCGTTGAAATTTGAAATAACTTATATTTTAGCATTTCTGTGTCAGAAAAAAAAATTACCAAAATAATTGTCAACAAACAGTTATCACTGCCATTGATGGTGCGTGTGCTCGACAGCTGGTATTACTTTCCCCTAATTAGAAGCTATACTAATTCGAACACTCTTGCATGTGTGACGAAACGTAACTATGATTACTGGACAGTTTATTCGTGATGTAATTATATGTAAACTCGTTAAACACTCACAACAATACAATTAACACAGCCTAGATCGTATTCCAAGTAATGTTGTGGTTAATGCCCACTTTATACGCTAGAATTGTTGATACAAGACCAGGACAACGCAATGTTCTTTTTTGTGAAAAACTTGAGTCTCAGCATTGTGAAATCATTGTGAAATCATTGTGAAATCATTGTGAAATCATTGTGAAATCATTGTGAAATCATTGTGAAATCATTGTGAAATCATTGTGAAATCATTGTGAAATCATTGTGAAATCATTGTGAAATCATTGTGAAATCATTGTTCTACTTATTGTTAGCCCTGTCGTCGTAATTGGGAGCAGTTGGGGATGACGTGCTCATTAGCAGTTACCGTACTCAATGCCCGATCGACCCGATGAAGAATAACAAGACAAAAAAACAAGTTCCGTGGCCCATTTGCGGTCGCTGCGTGTCGATATCTGAATAAACCCACGCTGTTGAAAGTTGAATAGCTCGCAATTCGATGTTTCTCCCATCTGGTGTCAGGCTATTTTTTGCTAGACATTGTATTCACCAATAGTTTTGGCACGATCGTATGTATGTGCAGAAGTGTTGCTTATGTTTGTCAGTTTCGTTATACCAGAAGCTACAGTGTTGTCAATAACACCGGTAAATTTTGATGGCGCCCTCTCCCGACGGGTTGTGTATATAACAACAAGGTGCACCTGATGGTTCGCTAAAGCGTATAAGTTTCACCGGTCATAAAACAAAAAACCGCAAACTTTCATTAAACACCAATATACGGCGTTGGTAATGAGGTGTCCTAAATGTAGCCTATTTTTATATCCTGTTAATCCAGCTAGATCGTGTCGTCCTCCCTATGTGGCATCCAATCCTGTTCTAGATTCTCAGTGTGCACACAGAGTTTAAACTACACCTACACAGTTACACCACACGACCGGGGGACTAAGTTCAATAAATAATAGCACTAGGCCTTATACTACGGCTCATGCAGCGACACACAGAGACAGGCAGGTCCTGGTTGACTTTGTTATTGTTTACACGAGACGATATTGTTGAAACGACGAGGTGATTGTTACGTCATTAGATAGAGTGAAGGCCGTTCGACCACACACGCAGCGTCGCTTCAAAACAGGTTTAATTACCTTATCCATCACACTTACACTTACAGGTTAATGGGCTGATTTAAGCCATTGGCCTTTGTTTATGCCCATATCCTAGGCTATTCCAGTGCTTGTCGAGTCTGGCCTTAAACTGTGTGACGGTCTTGGCATCTACCACATGTTGTGGGAGCCTGTTCCACTGACCTATTGCCTTGCAAAGATCTGTCAAGCCATCAAAAATGGGCGCCGAACACGCGGTGCGTTTGTGCAGTCCGTCTTACATTTTGTTGACAATCTGGCCTGAAAAGTTTTTCTTTATAACAAAAACATGAGACCTGTTTTAAAGTGACAACAATAGCCCTATGCAGGTATGTTTAATCTGCGAGATGCCATGCCGCAATAGTAATGTAATTCATGTATATATATATATATACTCTTTTATCAACATTTCTGCCAAAGGGAAAGTGTGGCGGAGGTCACCCGCAGGATTTTGATTGTGATATAGAACAAAAACCGATGTAGCGGATTCATCAATTGCAAATGCGTACACGTTTATACTGGATGATCGACCTGCAGACTCGTCTCATTCGATGGCATCGCCTCGTGCAAAGAGGCAGCGGCGGGCACAGGGGTTTTGATGTTGTCAGAATTAGTTTATGTTACCCTGTTAAAATATTACCCTCTGAAAAGGCATTACCATCGTTAGCTCTAAAGAAGACAAACACGAACTTCGGCTGAGTCGGCATCCGTTTCTGATTGAAAGTTAACACGTCGGTTAAAAAGCTTAGTTGGTAACGCTACCAGACAGAACAGGAAAACCGAATCAAACGGTGACCAGGCTGTTTATTGTACTGAAATGCCAACGCAAATTCAAAACAGGATTTAACATTGCGGGGGTCTTGTAGTCACTAGTAGAGAAAGTTTTGCCGCAGACGTGATTTTTTTTAAAAGGCCTATGTATACGCCTAACTTGTTTTTTTATATTTCACAAATGGGCCAATGTCTCACTGGAATATGTTTGAAATATATAAAATGTAAGTGCTACATCGTTATCCAATGGATTAATTTCCAACTAAGTGACGTATAGACCCACTGGTGTTTGTGCTGAGCAGGAGTACTTCGCGAGCCGGTTGTTCGGGCTGATGTCAACCCGTCATGGCGGGGGCCGGATGTCTGTCGACGTCCTCATGCGAGAACTCACCGACATCGCCGGAAGTCCCATCGAGACGAGACTGAAGACGCTCTTCGACGTCTACGACGAAAACGGTAAAATCACTCTTTGGTTCGGCACTGGTTAACGTCCCTCGTATATTGACTCCGTTTTTGTTCCTAGACGTGTTTTTGCGGCTGTTGTTGTCAGTCGCGTCGCACGTTAGGGCACGCGTTACCGTCAACGCTAAATACTGTGCACACACTGCTACACAATTGCCACTGGCACTCGCGGACACGCACACATAAACGCGCAAGTACATGCACGCACTGAAAACATGACATGACACAGAGATAAACTAAAACGTTGACTCGTCTATGCCGTAGAGTCTGGCAGCATCGACGCGGCCGAGATGCGGACGATGTTGGCGACATGCGTCTCCGGCGGTGTTCTCGGACCGACCGACAACGTGCTGGATACCATCACGCTGTCTCTGTTCGACGACGCCGACAAAGATGGCGATGGAGAGATCTCCTTTCTCCAGTTCTGCGATGTCCTGCAGACCCATGCCGAAATACTCGACAACCTCGCCGTCAGGTGAGTGGTTACCGCCAGGTGGCGCTCAGAAGCTGTGACTAGTATCCCTGTGTAGGGACATGACATGTGTCTGGATGGTTGGATTGGAATAGTGGGTGAAATGGTAGCTATATAACGTGGTGAATATTGTGTTATTATTTCTTAATTTTCTTTGGTAAAGCGTGGAAAATAACTTGGTTTTTGGCCAAAAATCCTGTTTTTTTTTAAATTATTGATGATTACAATTTTAAAAAGTGTCTGGTAATTATGAATCGTAGAGTATGCTGAAAGCACCATTCCAAACCTTATCTGGATGGCAGAATCACTCCCAGATATATCCTTTTTCCAAATGATGAAATTTAAGAAACAATGTTTTTGAGAAACAAATCCGTCAAAGATTGCAAAGTGGATTTGATTATTTGATCGACACGCTTGATCCGTGAATAAAAGTCATTTAGAGAAATGTATTGATATTAACGTGAACGTTTATGATAGTAAACATAGAAAGCACCACAATCTGGCATAAAACCATTTTGAATATTTTTGGTTAAAAACACCATTTCACCTGGGGTGTCTGGATAGGTGGTTACGGATGACTGACTTACTTGGTGGTATGTTTGATGCGCGTGTGTTTGGAACGATTGATCAACGAGGTTGACATTTCGACGTATGGCTCTGGTGAGATGCAGTGAGCGATCTAAACCTCTCCCTTCGGATTGCAGTCCGGCTTCCTGGCTACGAGAGGCGCCCCAACCGCTCCAGAGGTCGATGTCAACGTGCGAGCAAGTAGGGAGACACTACACCGACCAGCAGTTCGGGCGAGTCGTCTTCTTCGTGTTGTACGGCGTCATCAACACCATCTTGTTCACGGTCCACGCCTACAGCCACCGAGACAGCAATGCCTACATCATTGTCGCTCGCGGCTGTGGCATGTGTCTCAACTTCAACTGCGCCTTTATCATCGTCTTTGTGCTCAGGTGAGGACTTGCTTGCGTATCATGCTTTACGAGAATGTCGTTTCGAAACTTGTTTTTGTACTGTCAACACTATTGACGGTTTACATCTGTATGAGTTTTTATCTATACCTTTAGGGATTCGTACACACAACTTTCAAAAGTAGGCCTCAAAAGAGCAGCAGATAAAAATTACATTTAGAACTTGAATAGAGTCTGTATCAGAGCAGGTGTCTTACACGTTTTGCGAGTTTTAATCTAATGTGTTTATACAATGAGAACAATACAGTTTGAAGTGTCGTGAACGTTCCATTTCGTTCCTCGTCATACCATAATTCCGCGATAAGATTAACCTGCTACTTCCGTTTGTAGTAAATGAGAATATAACTGCAATTGCTCTGGATTAATCTCTGTCGTCGTCACTGTCATCATGACGATCATCAATCATCATCATAATCGTAATCATCATTATGATGATCAGGACCATCACCACCGCCATCATCACCACCATCAATTACCTGTTCGTCTACTGTGCTCTCAGATACTGCGTGACATGGATGAGGTCGCTGAAGCTGTCAACGTATCTGCCCCTCGACGACAACATCTACTTCCACAAGGTCGTCGGCGTCGTCATCGTCGTGCAGAGCGTCGTCCACACGCTCGCCCACCTCGCCAACCTGTGTGAGTGAAACGACGTCGACGATCAACTTACACACGCACACAACAACATCTCTCGAATTTCACCGTCATCGCCTTTTGAGAAGAGAAAAATAATACAAAAATAGATTGTTAATTGCTTCCGGACTCGGTTACATTCATAGTTTTGAAAATATGTCAAGTTATCTTTCCAAGTCCTATGTTGCTTTGAACGGAGCTTTCGAGATCTTCACGACGTCTTCATCAGCGTTGGTCTATGCCACTCTCGGTCGTCATGTGACTATGTTGGTAACTGCCACATGACAACACAGTCACATGATGACCGAGAGTGGCGCAGACCAACGCTGATGAAGACGACGTGAAAACGTCGAAATCTCCGTTCAGAGCAACATAGGACTTGCCATATTTTTAAAAGAAAGATCATCATCATCAACAACATTGTCATCAAAGCCAATCAAACAATGAACCAACCACCCAAACAACAACCAACCAACCAATCAATCAACCAACCAACCAACCAACAAACAAACAAACAAACCAAAGAAAAAACAAACACATATCAATAATAACAATAGAAACAACTCTTACTAATGATTCTTTAAATAAACGAATAATCATCTGAATCCGAATCTGCCCTCATTTTAAGATATTAAGGATTTGCAATAAGAAAACCTTGAGTCCCAACTCGGGATTATATATGCGTAATTTACATATCTTCTATTTATACAGATGACTCTATTTGTTACAAACGACTGATGTACTAGTCCATTGTTTTAAAATGATCCCAGACCGAACATATTTGATTTCCTCACACTACAGATCTGTACACGTCTTCGGTGCCGACTTCCGGTACGAACGCGACGTCATCGACGACGACGCCCTCCTATTGGGAGTGTCTGTTGACGACTCGCTGTGGCATCGGCTGGATCCCCGGCTTTGGCTTCGCCTACCTCTCGGGCGTCTTGCTGTGGGTCGCCCTCCTCGTCATCGTCATCTTCTCGCTGCCGTGTGTCAGACGGGGAGGCTATTTCCAGGTGAGTCACCATCGCTTACATGTAGATTATGATACACACGTTCGTAGGCTCTCATCGTCATATATATCATAG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01794	Ferric_reduct	Ferric reductase like transmembrane component	Family	Interproscan
PF13499	EF-hand_7	EF-hand domain pair	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002048	Domain	EF-hand domain	Interproscan
IPR011992	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR013130	Domain	Ferric reductase transmembrane component-like domain	Interproscan
IPR018247	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR050369	Family	Respiratory burst oxidase/Ferric reductase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11972	NADPH OXIDASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0006952	Biological Process	defense response	Interproscan
GO:0016175	Molecular Function	superoxide-generating NAD(P)H oxidase activity	Interproscan
GO:0042554	Biological Process	superoxide anion generation	Interproscan
GO:0043020	Cellular Component	NADPH oxidase complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for PE_Scaf10305_19.3 global RNA-seq network