Gene detail

Detailed information of PE_Scaf10160_5.5 in Paraescarpia echinospica Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
PE_Scaf10160_5.5	CAMP-DEPENDENT PROTEIN KINASE REGULATORY CHAIN	Superscaffold4	6507085	6517377	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

PE_Scaf10160_5.5

CTTACTATCCCTTCTCTTGTATTTACTTCTGTGCGTTTCTTGTCAAACATTGGCAATGTGACGATTGTCTATATTTTTAAGATAAACTTAAATGTTTTGTTTTCTAGAGGCATTGGTGGACGTGATCAGGCACAGTCACGTGACAACTTTCCAGCAGGGTGACGTCATCATAGAACAAGGCCAGAAGGCTTTAAAGTAAGCACTGCAATATCCGGCGAAATTTATGTATTACACAATCGAATGTTGGTACACTAACTTGCAACTGTATGTGTACAAAAGTACACAGGCAGTACAACCACCCACATTAATTCGACAATGTTCATTGTCTATTTCTGCTTAATGGCTGACTCCCGTTGTGCTTACGCTACTGGTATTGTTATTATATTTGCACAACTCTTCCATTACATGGTGCTAATTGTCCAATTATTGTCCGAGTACTGACTACCTTTGTAGGGCTAATTCTAAAGCACAATCGATATAAAGTTGTAGTTTAATTACTACTGTGAATGGCTAGAGGTAGTTTACGTTCGGTCGTGGGCTACGGAACCTCGCGGTTAATCTATTGTGCTTTGTCTGCGTGAGTCTCAAATATATATCCGTATCTTGTCTACCCATCTTACAACCAATATTAATACTCAAATATTCGATCCATTTTCGTCTCGAACGCAACTAACTCCCACAAATAACGTTCCCAAAGCATGATGCAATGTGCAGCTGCTGCTACGACTTCCGCGTTTACAGATTCTTTGTGATATTTCGGGGTGAAGTTTCCGTGTTCAGTCGAGAAACGTCGGACGACGATGAGTCGTCTGAAGAAGCTTTCACTTGGCAGAACAAGTCGAAACTCGGAACAGCCATTAACCAGTTAGGTGTGTACTGGGGGAGATGTTGTCAGTCAACCAGTTGGGTACGCACGGGGGAGATGGTATCAGTCAACTAGTTGGGTATGTACGGGGGAGATATATTGTCAGTCAATCGTAGGATACGTACGGGGGTGGTGTCAGCCACGACACAGCTTGCTCCAATCGACGTGGCGTATCTTTCTTATAGATTACAACTGCATATGTCAAGAAATAGAGTCTTCAAACATTAGGATAGTTCTCGGAATTAGTAGAGAAAACGCGTGTGTAAAAAGACATTGCATTTGTAAAAGAGAAAGTATTCAATCACAAAGAGAAGAGGAATTGATTAACCATTTACTGTTATTAATTATGTAAATTCCACCAATATCAATATATATTTGAAAACAAAATTGACATGTACCTGAAAGAGAAAGATAGATAGATAGAGAGAGGGACAGAGAAAGAGAGAGAGGGGAGGGAGAGAGAGAGGGGGAGGGAGAGACAGGGGGAGGGAGAGACAGGGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAATGAGCGGATATTAAATCGATATATACCGAGCGGGCTTGTGTGTTTGTGTGTGCTTGCGTATGTGCGTGCGTGCGTTCGTGCGCGCGGGTACACATATGTGAGTGTGTTATGCCGAGTACATGCAATGTGTAATACTCATCATTACTCAACCACAGGCTATGCCAACTCTTTCGGCGACCTCGCTCTCACATCGGCCAATGGCTACTACACGGGCTCAGTCGTCGCTAATGACGTCACCGACCTACTTGTGTGCCCACGTGACGTGTACGAGCGAACGGTGGCGGACTCTGTCGATCGGGAATATCAGCGGAAGTTGAAGTTCGTCAACACGTTGCCACTGCTGCAGTCATGGCAGCCGAGGTTGAGGGCCTACGTGGCAGAGTCTATCGTAACGGAGGACTATATCTACGACGAAACTCTCGTGAGACAGGGCGAGACTGCAGACACGATCTTCTTCATACAGAGGTACGTCATATCTTGCTAGTCGTTAGCCTGAAAACTGCGACTACCTGTCAATCGTTTTGAAGTGTATGATAAATAACAGCGGGCGGACGGATGGGTGGGTGGGTGGGTGGTTGGGCGAGTGGTTGGGCTGGTTCATGAATATATGCGTGGATGGATGGGTGTGTGGTGGTGGGGTGGGTGGATGGGTGTGTGGGGGGAGGGGTTGATGGGTGTGTTGGTCATGCTTGCGTGGACGGAACGGAGAGTCACTTGGCGAATAGGTGAGAGAGAACCAGTTTTAGTGTGCTGGACTGTGCCTGTCACACCACTTTTTAGTTTCTTCTTGCTCAACTGAATCTCCGTTACAGAGGAGAAGTGAAGTTGGTGGTGGAGCCGGCCGCCCACCTGCGCCAGTTCCCGAAGCTCATGAACACTTGTGAGCGGGAAGAGGAGACAGTCGTGCAAAAGCAAAGGTGCGTCATTCCTCCCACATTGCTCTATTTGTATAAAAAAAATGATTTCAGATTAAGTGAGGCGCCGTGGTCGAGTGGTTAGAGTGTCGTTCGGAGGAATCGGGGTTCGAATCCTGGTGCCGGCCGGGCGATGGTTCGGTAGTGGTTCGGCCGCCGATTCAAAACTAGGGAAATGTCGTTCACCCTACGTTGCATTTGTCTTTCGGAAGATACGATATAAGCCGTTGGTCCCTTCCAGCTGGTGCCTATGTCAGAGGAAGTTAATGATCCCACGCATGGAAATAAAAAAACCTGTAGTTGACTCACTGAGCGGAGGTCTCATTCTCAAAAACCCTACGACAGAATCATCAACAAACTGATGTTGGTCGTAACATTGAAGAAGAAAGGAAGTGATTACTGTTATAGTTTTTGGTAGGTGGAACATTCAAATTGCGAACAATACTTCGGGTTTATTTAACGCAATTTGGTGGTAGTATACCTTCGGCATAGTCTTTCCAGTATCAGAAACATAATAGCAAAAATAGATAAGCGAGCGAAAACTGAACAACTGTCAAACACGTTCAAAAAACGCCTTTTTAACGACTGCTAGTACCATTACGGTTCGTCGGATCCCAACAATATTGATGTCGTTTGAAAGTTTAAGCTTTCTGCTATTCAAACATATAAATGGTTTCCTGATAATCATTCTTAAAATAAAAAAAAAACGGACCTACAACCGGGCCCGTTCCGGTGTCTTAGACACTGCGAAAGATGTTGTTTCGTCGACACAGTTCACCAATCTACCGGTTGAGGCACCACTATCTGATTTCATGGTATAAGCTAAGACCGTATATCAATACAAGACGGTGCAGCGCGCGCTATTTACATTGTTCGAGAAAAGTACATAACCAGTTCGTCCGCCATTCTGGAGTTTAACAAGATTTAACAAGATTGCCATCCAGAGAATTAACTCTAGATGGCAGGTGGACAAGGAAGCCCTTTGGCTTATCGAGAGTCCAACCCTTTTATCTACATATATCCAGCCCTTCTGAGGTATGTGTCGATTTTATTTTTAAACATATTCACACTACTAGCACCCACACAATCATCAGATAATCTGTTCCATTCATTCACAGTCCTTTGTGAAAATGAGAACTTTCTCACGTCTAATCTACACTGCTCCTTTACTAATGTAACTTCATGTCCTCTAGTCTTTCTATCTTTCTTAACTGAAAAAAACATATTTCTATCAATATTTTCATAACCATTCAATATTTTAATTATTTTGAATTGTGATAGGTAAAAAACTTCAAGGATTACTTTAATATCTTTCATTTGATATGACGCATCACTGCTTGGTGATTATTCTGATGAAATGAGGTCCCTGAACAAATACGTTAACATCGCGCGCAGCGGTCCCGCAGGCGCATGCGCTTGCCTCCCGAATGGCGGACAAAAACCGTCAGTGTAGACTGCCATTTTCTCGCTCAGTGACGCCTCCTGTCCAAATAGAGGCTCCTTGGTATAAGCTCCTCCCACTTTCAAACGGCTGCTAAAATGACATATGCGAAGTAGGCGTGACGTCACAATCACGTATATCAACCAACCAACGCAACGAATTTAGACCCGTTGGGTGGCGTACCTTATTGTGACGTCACGCCGACGTAGAGATATATCGGTTTCGCTGCGATCAAAGCACATCAATTTCGCCGCGGTTTAAAAGTGGGTGGAGCTTATAACATGAAATCAAGAAATGGTGAAGTGCGCATGTCTGAACCTATGCAAATGAGGAAAACAGCGCCGCAATCGGAAGATTAGTGTAGTACCCGCCGCCAAATTCGTTCGGAACCGTACAGAACACCGAAAATGGCGTGATTATAGGTCCTTTTATTGGTGTTCTTTAAACGGTTACCGGGAAATCTAGATGACGCTAAAATAACAAAAATACATCCTTTCAAATGATACCAAGATCGTCACGACAGGACGAACCGTGAGGGTGCTAGCGACCGTAGAATTTCATGTTTTGGACGTTTTCTGAGTTGTTCATTTTTTGCTCGCTTATCTATTTTTGATAATAGTAATAAATGAGATTGTCATACAAAGCGACAGGCTTCAGTTAATAAGAAAACCATTGGGGCATAACGGTGTACATATCTCCATGCATGTGACGTCTCTGATATGTCAGTCTAGTCTTGAACTATTCTCACTGCTGGCAATTACGCGATCAGTACAATCTTTTTGTATTCCTTTGTGTGAATTACTACCTTCTCATACGATATCTACACTGTCTTTTGTTAATGATATCTCTGTTCGCGTGCGTGTGTGAGTGTGTGTAGGTGCGCAAAGATATGCCTGTATATGGGTGACGGTGTGTGCATGCATGCGTGGCTGTGTATATGGGTGAGGGTGTGTGCATGCATGCGTGGCTGTGTATATGGGTGAGGGTGTGTGCATGCATGCGTGGCTGTGTATATGGGTGAGGGTGTGTGCATGCATGCGTGGCTGTGTATATGGGTGAGGGTGTGTGCATGCATGCGTGGCTGTGTGCATACACATATATGCTTTAAGGGCGCAATTGGTGGCATGAATCATTGACAGTTGTGGTCACAACTCACTTACTTTTAATAAATTGTGCGTGCGTGCGTGCGTGCGTGCGTGTGTGTGTGTGTGTGTGTGTGTATGTTAAAAACTTCAAACGCCAAACATTCAGGGATTATTCTACAACCTCATGATTTTAACGTAACCCTTTTATTTTGTTAAAATACACCGTATATATGTAAAGGTTTCTCCGCTTGTATACGGTACGTCCATTGTTCTGAATCTAAAACATAATGCGCGCGTAAAGCGCCAAATACTTCGGGAGACCAGTCCCTGCGCTGTGGATTAGGTCGCTTGGCAACGTGAAGCAAACGTTGAGACAATAAGTTTACGTCCACCCTCATGCCAATACCACAGTAATCTGAAAATGATTGGACACCTCTACATTATTACGTCCCGAGCCTATCGATGGGCATGAACTTCCCTTTCTCTCCGAACTTCTCATTTCGATCGTACAAGTATTGTAGCCTGTGCGTGGCGCGGTTGTCGACGTTTGACGTGCCTTTAAACCGTCTCATAAATGTCTCTGCAACGATGCAGTTTGCTTTCTAATATTTAGTAGATATTACAATCACGACTGTCACGTATGAACTTCCAAGTTATCTCGTCATGGGACGAACACTTTTGCTAGCCATAATAATCAGTCACATAACTAATCGGTCGATAACCAATCATAACGCAGATATTGCTATTTTTCAGAAATCATGAAGCGGATGAAGAATTCAAAAAATTGACTACTTTGATTTCCATGAAATCCAATCAATTTGCCAGGCTGAAATGTGCGAAGCGGAAGGGACTCGCCTGTCATACAGATCCCACAAAATTCGCTTTATGCTTTCTCGAGGCTGGCCACATATTAGGTACGTATTTCACGTGCAGTTGTTTTGTACGATACGCAATACGCAGTTTCATAAAATAGGTTGACACCAAACAATTTATCATAGGTCTACGTGTTATTTTTCTGAGTGATGGTTGCTGTATGCCCGGTGGTGTTGCCGAATTTGCTGGTCATATTGCTCGCATTTGCTGGTCATATTGCTCGCATTTGCTGGTCATATTGCTCGCATCTCATTAAGCGCCTGTTTGTGTGCATACTTGTATCTTAATACTGATTTGATATGTGAAAGAATTGTTATTGGGAATGTTTCTGAAATTGTTATGGTGAAATCATATTGTATGTAACATTCGTTAATATCGATTGTGTCAGTTACCAACAATGACGGTAAGTGTGTTAGTTACCAACAATGATGGTAAGTGTGTCAGTTACCAACAATGATGGTAAGTGTGTTAGTTACCAACAATGACGGTAAGTGTGTTAGTTACCAACAATGACGGTAAGTGTGTTAGTTCAATCGTCAAACGAGTTGGATGTATCTAATCTATCAGAAATAGATCAGCGTTCACCGCTGTTGATTCCGTCGTAGATATAGCCAATTAATGCTTTCTCAATACGCCGCAAGATGGCAGAACTGTACGGCATGATTGCTCTACTCTAGATCAGGGGCCGGCAACCTTTTTGAATGGAGGGCCAAAGATATGACTTGGTCTAAGTCAGTGGACCACACATGTATTATCGAATATTGATGATCATTAGCCTAAGCCTAGTGGAAACTGGTACACTATATTTTGTTTGGAATCTGAATATAAGTAATCTTGTTTTTATGCATTGTAATTTAACCTACAAATTATGACCAGTTGGTAATGAATTTTATTAATATCGTCAGACATCAACGTCTAAGTGTGACCAACTCTTGGATGTGACTACCAAAAAGCACCCATTATTCGTGCTCAGTGTTTTCAGCACACGAATTAGTAGTTGTGGAACTTGACGCTGTTGCTACGACACCAAACAAATTGGCAATGAGCTTAGCATGTTTGATCAGGTCAGGAAAATGTTCCGTCAGCAAATGCACGTAGTAACATTATACACGCGTCAACTCTTTGGCGGTAGCTTTGAGTGTCATATAGCCTCGTTGTAGTTCGGTTAACTCTATCCGCACAGCAACCAGCACACTGATGATTTGGGAAATTAGGCAACTCGTCACTGCGACGAATCCTAAAATCGGAAAGACACCCAGCTTTGCAGTTCGCTATTACGCATCCCATAGCAACGTGATCACGGAAGCGGAGACCAACTGGAACATCTAACTTATAAGATGTTCTCGCAAATCCATTTGGGAGGTCTACAAATTCCGGTACTGTTGTACTCGTCTGCTCGTGAACACCCTATAACCGATATATCAGCTCAAGTGGCCTGTGTGCAGCGCAGCATAGCCACACACACTGGCGCTCTTCGCAGTAGAGGAGGTCTTTATATTGCGCAGTAATCGCGGCCAGAATGCATTGGAACTGCCAGTGGTTTATTTCACGAGCGCGAACATAGTTTACGGTTTTCACGGTGACGCTCACTGTGTTCTGCATTTTCAATTTCTTGGCATTCGTGTTTTCATGAGAGATGATGCAGCAGTTCTTCCAACCATGGAAGTTGCAAGTACTGTTGTCACCCCACGAACCGCTTGTGGACAATTTCACTTTTAGTCCGCGGGCAGCATGAAATAGCTACGCGGGCCGCATTTGGCCCGCGGGCCGCAGGTTGCCAACCCCTGCTCTAGATATTCTTATTGTATAAATCTGTCGTCTGTTATAAAACTTGGGTGGGTCCCAACAGACCGAACGGCGAAACCGATGAGAGTTTGTGTGAGTTGTATTATTGTTATTATTATTAACATCATCATCGTCGTCATCACCATCACCATCACCGTTATGAACATTATAAGTATTATTATCATCATCGCCATTATTAATATTATTGTAGAGGCAGTAGTGGTATTAATAGTAGTAGCAGTAGCAGTAATAGGAGTAGTAGGAGAAATACTACTACTACTAATACTACTACTAGTAGTAATAGTAGTAGTAGGAGGAGTAGTAGTATGAGTAGTAGTAGTAGTAGTAGTAGTAGTATGAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGCAGTAGCAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAATAGTAGTAGTAGTAGTAGTAATAGTTGTAGTAGTAGTAATAATAATTGTAGTAGTAGTAATAGTTGTAGTAGTAGCAGCAGCAGTAGTAGTAGCAGTAGGAGTAGTAGTAGTAGTAGTAGTAATAGTAGTAGTACTAGTAGTAGTAGCAGTAATAATAGTTGTAGTAATAGCAGCAGCTGCAGCAGCAGCAGCAGCAGCAATAGTAGTAGTAGAAGTAGTAGTAGTTGTTGTTGTAGTAATAGTAATTGTTGTTGTAGTTGCTGTTGTTGTTTTTGTTGTTGTTGACGATGTTAGTTTCGTTGGTGTCGTCGTCGTCGAAGCAGTAGCACCAGCAGCAACAGCAGCAACAGCAGTACTAGGAGCCAGAATATCATGTTTTTTGTGGTTGATTTTTTATAATTCTACAACAACTATAACTGTTTCTTAGGTGACGTGGAGTTTGTCGCAGGATTGCCGACATACCACGTGACCGCCGTGTGCACCCTCAACACGACTGTCATGGCGCTCAGTCGCACTTACTTCGAGCGACTCTTCGTCAAACGAAACGCCGACACAGTGGCGCGCATGCGCCACATCGTAACGGAGCAGCTGTCTGCACGGACGTCACGGCCCCACCTTGCCCGCCAGCTGCCTCTGTTCCGGTGCGTTATCGACCACCTCAACCAGGTGACAACCAACCGTCTACCGAAGCCAAGCGTCAGTCGCGATGATGTCAGTGTCAAGTCAGCCGTGTCGTGGACGAACTTCGGGGCCAAGTCTGTGGTGAGTACCACGCGTTCCCTCCCTCTGACCACCCTGAAGAGGCAGAGAGACAACAGGACTAGGACAGACGCGAGCGCCCAACAAGGCTCCAATGGGCTGTTCAGCGTGAGACCGCGGGAAGCAACGAGACTCCGCTTCAGCCACGCCGTAGACCAGCGGCCGTTGGGTAGGAGGAGTGCCGGAGGCCGCAATCCACGCTCGGGAATCTTCGTGAAGCTCATGCAGGTGTCGAACCCCGAGCAGAGCGCCTGGCCCTTGCAAGTCGACCAGGAGGAGTACACATACCTGCTTCAGCTGAAGCGACGTCTCGCCAAGCAGATGGACGATTTGTTCCCACACATGTCCGGCCACCTTGGGCCCCGGGAGAACACCAGGCTGGACCAACGGCTGCCGAGACTCGCAGACCGCACGGACAAGCAGAAATACAGCGCGCGGAAACCCGCCTCGCAGTCAAGTGCGGCGTCGAAACGGAGAGTAACGACGTTCACTCTACCGGGGGTTTGATTGGTGGAAGTCGTACTGCGCAGAGATATATCGACCAAGGCGAATGACAGACTTGTGTGCGTTATCAATTAAAGACAGTGTTCGCCTCGTTCCCATCCTTTCTCCCTCTCTCCCTCTCTCCCTCTCTCCCTCTCTCCCTCTCTCCCACTCTCCCTATCTCCTTCTCTCCCTCTCTTCCTCTCTCCCTCTCCATTGCTCTTCCTTTTCAGTCTCTCACCCTTTCTCTCCCTGTCTGTAGGAGCTGTGAAGGGAAATGACATACGGCAGGGAAATGTGATAGTATGTGTTCCTGACGTGTTGTAAGGGACATGATTATTGCAACAACCAGTAATGGACGCAATGCCTGGAATGCTGCAAATTGCAATGTTGCAATAGTGACGTTTGATTAGTACTAAGCATTTGAAATATTACAGTTACAGTATTAGGTCTACATTTATTTGCAATATTTTCAAAGGTAAGGCAGTACACTGATGTCCGTTGTATTTTGTCAATGTTTTAATAACAAATAAAATAAATAAAACATATTAAAGGTAAGTTCGTGGTACCCAGTCTTTGAAGTGCTCAAATCGCTTTGCATCGACCTGTTTAGTCGAACGCCACCATGACTTCTTCGGGGAGCGTTCAGCCACGCAGCAATTACTGCGCGAAAACTATTTGTATACAAATTTCCACCGCTGTTTATAGCCAGGCACATAAAGTAAGGAAGAAAACGAATTTGCCCAGTTTCGTAAAAGCAGGAAGACGATTCGAACCAAGAATCTCTTGATTGAAAATCCGATTCTCTAAAGCCTAAGCATTACACCTTCGCGTTCCACATATTGTGTACGACGTGATTGGTATACATTGTATTATTTGTCTGAGTGTTAGAGCATATATCTTTCCCGATTGTGGAATAAATCTTACTTTTATAACACTATCGTATTATTGTTATTGCAATTATTAAAACGTGCAGTATACATGTTATAGCGCTTCTGCACACTGGACGTGACAATCCGTAGAAGCGTATGTATTATGTGTATTTATCA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
--	--	--	--	--

InterPro

InterPro term	Type	Description	Source
IPR000595	Domain	Cyclic nucleotide-binding domain	Interproscan
IPR014710	Homologous_superfamily	RmlC-like jelly roll fold	Interproscan
IPR018488	Conserved_site	Cyclic nucleotide-binding, conserved site	Interproscan
IPR018490	Homologous_superfamily	Cyclic nucleotide-binding domain superfamily	Interproscan
IPR050503	Family	cAMP-dependent kinase regulatory chain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11635	CAMP-DEPENDENT PROTEIN KINASE REGULATORY CHAIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004862	Molecular Function	cAMP-dependent protein kinase inhibitor activity	Interproscan
GO:0005952	Cellular Component	cAMP-dependent protein kinase complex	Interproscan
GO:0030552	Molecular Function	cAMP binding	Interproscan
GO:0034236	Molecular Function	protein kinase A catalytic subunit binding	Interproscan
GO:2000480	Biological Process	negative regulation of cAMP-dependent protein kinase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for PE_Scaf10160_5.5 global RNA-seq network