Gene detail

Detailed information of OS493_038421-T1 in Lophelia pertusa Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
OS493_038421-T1	EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED	scaffold_577	30120	56100	-

Gene Structure

More details in Jbrowse Sequence

CDS

OS493_038421-T1

ATGGAAGAAAGTTGCAACGAGAGACAAGAAAATGAGCTGCAAGCTCTTAAAGCTATTTATTTGGATGACTTCCAAGATTTGCGAGACAGGCCTGATGATCCACCAAAGGTGTGTTTGAAACTGACACCCTTACAGAGTGTTGTAGCTAAGGAGGTATACGCCAGGGTTGATTTGATTGTGCAGTATACAAAAGACTATCCTGACCGGAGCCCCAAGCTGTCCCTGTGTAATGCTGAAGGTGTTTCAAAGGAAGATGTGGGCAAACTTCAGAATGAACTTCAGTGTATGGCAGCCTATCTTGTTGGCGAGGAAGTGGTTCTTCAACTTGCACATCATGTTCAAATATGTCTTGACAAACACAACAAGCCACCGCTGTCATGTTACGACACGATGATAGCAAACAAGCGTCAAGAGGAGGAAAGAATCCTGGCTGCCGAGCAGCAGAAGCTGCAAGAAGAAATTGAAGCCAACAAAGAAAGAGAGGAAGATGAGGAAAAGAACTCCAAGACAGATTCAGTCACTCAGAGTTTAAAAACACAAGATTCTGATCCCAGTCTGGCAAAAGAAATACCGCCTCTTCAGAGAAAATCTTCAGGCAATTCTATAGCTGCATCAATTCAACCCTTCTCACCCAAGAAAACAGATGGAATGCCTTCTGGGTACAACATCATGAGACGACGACGGAGTTCTGAAAGTGTGTGCGATGATTCTTTCACGGGAACAAGAGTGCTGAACTTTAGCAGCAGAGGAGAGCATGTAGTGCACTGCGGAAAATGTCTGGGTGATCTAGTTGTGGTGTGTGAATGGAGCTTTTCCGTACTCCAAGTCGGACCCAGACGCACACTGAGTGTTACTGATAAGCAGCAACAGGACTCACAAGGACGACTTATGAAACAGGTTTCCAGCATTGAGCAGGAGACTCTGTCCCTTATCAACCGAGTTAGTCATCCAAATCTGACTCATTACTTAGCCGTGAATGTGCAGGAATCCACTCCTCTTAAAGTCCAGGTTTTGGTAGAATATGTTGGCGGAGGAGATCTCGGTCTCCATCTTAGAAGTGGAGGACTACCATTAGCACAGCTGCGACAATACACACAGCAACTTGTGGAGGCTCTCTGTTATCTGCATGGTAAATCTGTGGTACATAAGGATTTGAGGTTAACAAGTTGTCGCCTTGACTCTGATGGAAATTTGAGACTCGCTGACTACAGTGTGGGTAAAAGGCTGTCGGATTTGTACCAAGTGTATGGCGGGAACACGAAGGACACGCAGAGTAACACAGGTGAAGACAACAACAAAACAACCTCGCGTTATGGAAAAACTGGCGACATTTACAGCTTGGGTACAATTGTGCTTTCTTTGGCTCTTGGAGAAATTATCACTGGAGACGTGAAGGAAATACCAACATCTTTGCCACCAGAACTACGTGACTTCCTTTCAAATTGCTTGAAGGCCGACGAAAGAAACCGCTTGTCCGCTTCTCAATTACTGGAACATTCCTTTATCACTCCTGCTATTTCCAATGGCTTGCCAAACGGCCAACATGAAGCGGCTGGAAACGATGGGGTTGCTGGGAACGACGGGCCATCATTTCTTGTCGACCAACCGGAACACGAGGAGCCTGTCCCCGACTTTTCATTTTTCTCAGGTGTTCCTGGGAAATCGCGCGTCAAATGTGAGTTCGAGGAGCTGCAGTTTCTTGGCAAGGGAGGATTTGGCAATGTCATTAAGGTTCGCAATAAACTCGACAACTGCTTGTATGCTGTGAAGACGATTCCTCTCAACCCGAAGAGCTCCCAGTTCACCAAGAGAATTATGCGCGAAGTGCAGCTGATTTCCCGCCTCAATCATGAGAATGTTGTCAGATATTACAACTCCTGGATCGAAAACGCCGAAGAACAAGAAGGCGAAAAAACTCAATCAGGAGATGACCAAGGCCGCCAAAATCTCCCACCAGCTGCATCAAGTGAAGATAGCCTACTGAAGCTCAACAAGATCGATGCACCAAGCATAAGGAGTAATAATGTGGAAGATTCCTGGTGGCAGGAAGAGCAGGACCCGGATAAAAATGGATCGGACTCATCGTCTAGTGGATCGCTGGAATCGTTTCGTAGTCCAAGCAAAGCGTCATCCAAAAGCCACAGCGTGTCATTTTTTAACAGCAAATCCGAGTCATCTGAAGGCGTGGTGTTTTATAGGGAACATGGACGAGTCTGTTCTACAGTTTGGAGATCTGCTGGATACAGAGGTAACTCTGACGATTCTGATGAAGGAGTCGTATGGCAAGAGACTGGGACAGAGTCGAGCACGGAGCACATAGGACTGCAGTATTTGTACATTCAAATGGAATACTGCGAGAAAAGCACCTTGAGGAACCTTATTGACGAGGGCTTGCATCAAGATAAGGACCGAGTGTTGAGGCTCTTCAGAGAGATCGTAGAGGGACTGGCCCATATTCACACTCAGGGTATCATCCATCGAGACCTCAAGCCCGTAAACTTGTTCCTAGATTCTCACGGCCGTATCAAAATCGGCGACTTTGGCCTCGCAACCACGCACAGCATGACACGAGGAGGCATGGGCCCTGATCTGCCGGATTCAAACGAGAAGCCCCAGTCTCCCAAGAGTGACTCGACCCCCAAAGAGAGCATGACGGGTAAAGTTGGCACGGCGCTGTATGTGGCTCCTGAGCTTGGTAACCGAGCTGGTGTACGAGTGAAGTACAGCCAGAAGGTTGATCTGTATAGCTTGGGTATTATCTTCTTTGAGATGTGTTACAAGCCTCTGACAACCTCCATGGAAAGAGTTAAAGTTTTAGGCAATCTTCGAACGGAACGAATCATTTTCCCGGGAGAGTTTGACCACAAGCGCCTCGCCAAAGAAACGATAGTCCTCAAATGGCTCCTAAAACATAACCCTGAGGAGCGCCCCACGTCACAAGAACTCCTTCAAAAACCAGTACATCCCGCCCAAGATCGAAGACGGTCAGTTAGACGAAGTACTTAA

Transcript

OS493_038421-T1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan
PF05773	RWD	RWD domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719	Domain	Protein kinase domain	Interproscan
IPR006575	Domain	RWD domain	Interproscan
IPR008271	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR016135	Homologous_superfamily	Ubiquitin-conjugating enzyme/RWD-like	Interproscan
IPR017441	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR050339	Family	Cell Cycle and Stress Response Kinase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11042	EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0004694	Molecular Function	eukaryotic translation initiation factor 2alpha kinase activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for OS493_038421-T1 global RNA-seq network