| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| OS493_038188-T1 | PRE-MRNA-PROCESSING PROTEIN PRP40 | scaffold_526 | 32801 | 47730 | + |
| CDS | |||||
| OS493_038188-T1 | |||||
| Transcript |
| OS493_038188-T1 |
| Protein |
| OS493_038188-T1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00397 | WW | WW domain | Domain | Interproscan |
| PF01846 | FF | FF domain | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001202 | Domain | WW domain | Interproscan |
| IPR002713 | Domain | FF domain | Interproscan |
| IPR036020 | Homologous_superfamily | WW domain superfamily | Interproscan |
| IPR036517 | Homologous_superfamily | FF domain superfamily | Interproscan |
| IPR039726 | Family | Pre-mRNA-processing factor Prp40 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11864 | PRE-MRNA-PROCESSING PROTEIN PRP40 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000398 | Biological Process | mRNA splicing, via spliceosome | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005685 | Cellular Component | U1 snRNP | Interproscan |
| GO:0045292 | Biological Process | mRNA cis splicing, via spliceosome | Interproscan |
| GO:0071004 | Cellular Component | U2-type prespliceosome | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for OS493_038188-T1 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
© 2024 All Rights Reserved.
