Detailed information of OS493_037723-T1 in Lophelia pertusa Gene info
Gene IDAnnotationScaffoldStartEndStrand
OS493_037723-T1HISTONE DEACETYLASE HDAC1-RELATEDscaffold_4545787965636+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00850Hist_deacetylHistone deacetylase domainDomainInterproscan
PF01410COLFIFibrillar collagen C-terminal domainFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000885DomainFibrillar collagen, C-terminalInterproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR023696Homologous_superfamilyUreohydrolase domain superfamilyInterproscan
IPR023801DomainHistone deacetylase domainInterproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR037138Homologous_superfamilyHistone deacetylase domain superfamilyInterproscan
IPR050284FamilyHistone deacetylase and polyamine deacetylaseInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR10625HISTONE DEACETYLASE HDAC1-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000118Cellular Componenthistone deacetylase complexInterproscan
GO:0000122Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0004407Molecular Functionhistone deacetylase activityInterproscan
GO:0005201Molecular Functionextracellular matrix structural constituentInterproscan
GO:0008134Molecular Functiontranscription factor bindingInterproscan
GO:0016575Biological Processobsolete histone deacetylationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for OS493_037723-T1 global RNA-seq network
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