| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| OS493_036670-T1 | POLYCYSTIN-1 | scaffold_378 | 172436 | 190887 | + |
| CDS | |||||
| OS493_036670-T1 | |||||
| Transcript |
| OS493_036670-T1 |
| Protein |
| OS493_036670-T1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00801 | PKD | PKD domain | Domain | Interproscan |
| PF01477 | PLAT | PLAT/LH2 domain | Domain | Interproscan |
| PF02010 | REJ | REJ domain | Family | Interproscan |
| PF08016 | PKD_channel | Polycystin cation channel | Family | Interproscan |
| PF13385 | Laminin_G_3 | Concanavalin A-like lectin/glucanases superfamily | Domain | Interproscan |
| PF20519 | Polycystin_dom | Polycystin domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000203 | Conserved_site | GPS motif | Interproscan |
| IPR000434 | Family | Polycystic kidney disease type 1 protein | Interproscan |
| IPR000601 | Domain | PKD domain | Interproscan |
| IPR001024 | Domain | PLAT/LH2 domain | Interproscan |
| IPR002859 | Domain | PKD/REJ-like domain | Interproscan |
| IPR013122 | Domain | Polycystin cation channel, PKD1/PKD2 | Interproscan |
| IPR013320 | Homologous_superfamily | Concanavalin A-like lectin/glucanase domain superfamily | Interproscan |
| IPR013783 | Homologous_superfamily | Immunoglobulin-like fold | Interproscan |
| IPR014010 | Domain | REJ domain | Interproscan |
| IPR022409 | Domain | PKD/Chitinase domain | Interproscan |
| IPR035986 | Homologous_superfamily | PKD domain superfamily | Interproscan |
| IPR036392 | Homologous_superfamily | PLAT/LH2 domain superfamily | Interproscan |
| IPR046791 | Domain | Polycystin domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46730 | POLYCYSTIN-1 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005261 | Molecular Function | monoatomic cation channel activity | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005886 | Cellular Component | plasma membrane | Interproscan |
| GO:0006816 | Biological Process | calcium ion transport | Interproscan |
| GO:0016020 | Cellular Component | membrane | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for OS493_036670-T1 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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