Detailed information of OS493_035601-T1 in Lophelia pertusa Gene info
Gene IDAnnotationScaffoldStartEndStrand
OS493_035601-T1PRE-MRNA CLEAVAGE FACTOR IM, 25KD SUBUNITscaffold_326115561124163+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13869NUDIX_2Nucleotide hydrolaseDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000086DomainNUDIX hydrolase domainInterproscan
IPR016706FamilyCleavage/polyadenylation specificity factor subunit 5Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR13047PRE-MRNA CLEAVAGE FACTOR IM, 25KD SUBUNITInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005849Cellular ComponentmRNA cleavage factor complexInterproscan
GO:0006397Biological ProcessmRNA processingInterproscan
GO:0017091Molecular FunctionmRNA 3'-UTR AU-rich region bindingInterproscan
GO:0031124Biological ProcessmRNA 3'-end processingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for OS493_035601-T1 global RNA-seq network
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