Detailed information of OS493_035317-T1 in Lophelia pertusa Gene info
Gene IDAnnotationScaffoldStartEndStrand
OS493_035317-T1CRUMBS FAMILY MEMBERscaffold_317233751261861-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF01421ReprolysinReprolysin (M12B) family zinc metalloprotease DomainInterproscan
PF01562Pep_M12B_propepReprolysin family propeptideFamilyInterproscan
PF19030TSP1_ADAMTSThrombospondin type 1 domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000742DomainEGF-like domainInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR001590DomainPeptidase M12B, ADAM/reprolysinInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR002870DomainPeptidase M12B, propeptideInterproscan
IPR006586DomainADAM, cysteine-rich domainInterproscan
IPR013273FamilyADAMTS/ADAMTS-likeInterproscan
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR051022FamilyNotch Signaling and Cell Fate DeterminationInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR24049CRUMBS FAMILY MEMBERInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0030198Biological Processextracellular matrix organizationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for OS493_035317-T1 global RNA-seq network
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