Detailed information of OS493_034486-T1 in Lophelia pertusa Gene info
Gene IDAnnotationScaffoldStartEndStrand
OS493_034486-T1SUCCINATE DEHYDROGENASE 2 FLAVOPROTEIN SUBUNITscaffold_292186956201772-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00415RCC1Regulator of chromosome condensation (RCC1) repeatRepeatInterproscan
PF00890FAD_binding_2FAD binding domainFamilyInterproscan
PF13540RCC1_2Regulator of chromosome condensation (RCC1) repeatRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000408RepeatRegulator of chromosome condensation, RCC1Interproscan
IPR003952Binding_siteFumarate reductase/succinate dehydrogenase, FAD-binding siteInterproscan
IPR003953DomainFAD-dependent oxidoreductase 2, FAD binding domainInterproscan
IPR009091Homologous_superfamilyRegulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIInterproscan
IPR030664FamilyFAD-dependent oxidoreductase SdhA/FrdA/AprAInterproscan
IPR036188Homologous_superfamilyFAD/NAD(P)-binding domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR11632SUCCINATE DEHYDROGENASE 2 FLAVOPROTEIN SUBUNITInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000104Molecular Functionsuccinate dehydrogenase activityInterproscan
GO:0005749Cellular Componentobsolete mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)Interproscan
GO:0006121Biological Processmitochondrial electron transport, succinate to ubiquinoneInterproscan
GO:0008177Molecular Functionsuccinate dehydrogenase (quinone) activityInterproscan
GO:0009055Molecular Functionelectron transfer activityInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0050660Molecular Functionflavin adenine dinucleotide bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for OS493_034486-T1 global RNA-seq network
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