Detailed information of OS493_033394-T1 in Lophelia pertusa Gene info
Gene IDAnnotationScaffoldStartEndStrand
OS493_033394-T1PENTRAXINscaffold_263291452307383+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00008EGFEGF-like domainDomainInterproscan
PF00024PAN_1PAN domainDomainInterproscan
PF00084SushiSushi repeat (SCR repeat)DomainInterproscan
PF00354PentaxinPentaxin familyDomainInterproscan
PF00754F5_F8_type_CF5/8 type C domainDomainInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF12662cEGFComplement Clr-like EGF-likeDomainInterproscan
PF14670FXa_inhibitionCoagulation Factor Xa inhibitory siteDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR000421DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR000436DomainSushi/SCR/CCP domainInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR001759FamilyPentraxin-relatedInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR003609DomainPAN/Apple domainInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR026823DomainComplement Clr-like EGF domainInterproscan
IPR035976Homologous_superfamilySushi/SCR/CCP superfamilyInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR051360FamilyNeuronal Pentraxin and RelatedInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR19277PENTRAXINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for OS493_033394-T1 global RNA-seq network
TOP