Gene detail

Detailed information of OS493_032668-T1 in Lophelia pertusa Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
OS493_032668-T1	BOMB/KIRA PROTEINS	scaffold_246	486770	505701	-

Gene Structure

More details in Jbrowse Sequence

CDS

OS493_032668-T1

ATGCCCAAGAAGAAAACATGCGAAGTGCCGCTTCCTTTGGGTTGGGAAGAGGCGAGGGATTACGATGGCAGAGTTTACTACATCGACCACAACACGAAGCGAACATCTTGGGTCGATCCGCGCGATAGGTTAACAAAGCCATCAACATTTGCTGATTGTGTAGGAAATGAATTACCATTTGGCTGGGAAGAGCTGAATGATAAAGTTCTTGGAAGGTACTTTATCGACCACAATACTGGAGCACAACAAGCAGAAGACCCTAGAATACAATGGCGGAAGAAGAGAGAAACGATGCTTTATGATTATTTAGCAGTTGCACAGTCCGATTTATTGGCAAAACAAAACATGCTAGATGTAAAGAAGCAGAGGCTAAATGTTGCACAGGAAGAGGTTCAGTTTTGGACATCAGAGCTGGAGAAAATGCAGAGACGACATGAGGGACAAACAAAGCACGTAAAACAAGGCAGCTTAAGTTCTTCCTCGTCAAATTCAACAGTCAGCTCCATTGCCAGCAAGTATGATGTGAATCAACTTAAGAAGGAGATATCGCAAGCCAAGTCTAGGGTTGAAGAACTCAAAACAGAGATGGATGCAGTTTCAGGTGAAGTTCAAGCCCAGGAGGAGGGCTATGAAAAGCTAAAGAAAGTAGACAGAAAATTGTCTTCCCATCGCGGCTGCAAAAAGGAAGATGTACAAGAACAAGAGAAAAGCGATCTTATTCAAGCACTACTGAGACTCAAGGATAAACTGTCACTGCCCGATTCTTCAAATGAGATAAGGGACGACACGACTGGTGTTGGGACCAGCATTGGATCTCAAACAGACCTTGGTTCCGACTTAACCATTGAACAACTCCCTAGACGGGACAAACAAGAATTAAAAGCAGAGTATAAAGAAGCTCTCAAAAACGAAACGAAGCTACAAAGTGCCATCACTCGCCTGGATGAGAAAATTACTCAGGTTATGACAGATGACAATAATTCCAGGCCCATGTTGCTTCAGGAAAAAGAAACTCTTCTCGATGAAATTCGCCGGCTGAATTCTCTTGTCAGGAGCGAAGGAGAAAAGCACAAGCTCGAAGTTGAAAAAGACAAACTAGCAGCTGACCTTGACTCCGCGAGGGAACTTTCTCATCGAGTTATAGCTGATAGAATCCAACTTCAGGCCGAGAAATCGATGTTGGTTCACCAACTTGCTGAACAAACCAAAATGACCAACCTTCTAAACATGCAGTTGAGAAATATATCTGGAAGTACCCCTTCAGTCTCGTCGTGTTCAAGCCGGGGATCCCTCTCCTTGTCCGGAAGTCGAGGGTCCTTATCAGCCTCAAGCCGAGGCTCCCTTAACTCGCTCAACTACCCCGACATGAATCACAGCGGAGCAGCTGACGCGCCCAACCTCCGAGAGCTGCATCAACGCGTCACGGACATGCTTCAAGGGATGTCGCGTGACACCGCGTGTCAACCGATCTATGAAGTACGGACAACAGGTGCTGCTACAAGTTACACGCCCACTTCCGGTAGAGCGAATCAACCCAGCGCGAGCAACTCGTCGCAGGTGTCGCTGTCATCACGTGACTCGATTTCCTCTACGCATTCGCCGCCGATCTCTCCGAGTACTAGCGATCGTTCTCCGACGCATTCGCCGGCCACCGCTCGTGTCATGGCTACTGAAGGAGAGAGTACGGCCGGTCTGGATGGGACGGAGATGGATAGGAACTCTTTGCCTCAGGCTGAAGGGATACCAGTTCAACAGCGACTTCGACTCCTGACCGCTGACTCGAAATCAAACGAATCGATCAACGCCATTCCGTTCATCCCCATGTCTCCCATCACGGAGGGAATCCCGGCACTTCCGCTCAGACGCTGTGAAGTCCATCTTCCCCCGGCCGGAACGCGACCCGTCACCGCCGCACCCTCGGACGAATCCGTGGCAGCGGATAGCGGAGTCTTCGACGCGTCACAAGAGAACCTCAAAGCAGTACAACGGGGAGACTTCGACGAAGATGGATCGGAGACTTCGCAGGTCAAAATTGGACTAACGTACGATGTGGATCGCGAAGCTCTGGTCGTGTGTATTGATCAAGCGAAGGGTTTGAAGGCTCTTGGCAACACGACGCAATGTAAGGCGCCCGTGTTCGGAGAGCAGTTTCATATTCCTGTTCCCGAGAGCAAGCTGACCAGCAAAACTCTCCAGGTGAACATCCTTACCGTCACCAACTTTCAAACGGAAGTGCTTTTGGGTGGAGCACAAATCAGCCTTGCGGATTTCAACATCCAAACTCCTGTCCGATTTCGATGGTATAACCTGTTGAGTTGCGCGTTCTTTCAATCCGCGGCTGCCAAATACCAACATGGTAAGAGCAGCACTACGGCTCCGTCAATGGGTTCACTATCAATGGACAGCGTCTGTGAGCCAAAGCGAGGCAACTTACGACCGAGCTCATGGTGCGAGGGCTCAACATTCAGCCTGGAATCAGCGACTGGATTCGAGCGCATGCCCTGTAGATCAGTGAGTCAAGAGGTGCTCAACCAGGGAGTGGAAGGTCTACCTATCCGCAAGCGCATCGCTGGAAGGCCGGTAGAAAGAGCGCAATCTCAAGGCGACAGTGTTATCAGCGGTGGCTCGCTCCAAGACAGAGACAGCGACTTCGATCGATCGCCTGTAGCTCGACCCAGACCCCCGATGGTGAAGACGAAGTACACGCGCAAGTTTTCAGATCCGCAACCGCTGGGGTTGTTCCCAGTTCATGGAGAATACGACGAATTTCCCATAATGCCGTTGAGCCGTCTGTTCTTCGACATCAATCTAAATCGCAGTAACTCGGACTGTACCACACGTAAAACGGAAGGAAGCCCATTCGTAAGAATGTCAGTGGAAAGGACGAGCATGAGAAGGAAAAAGCGCCCAATGTCATGGCAAGGGATCCAGCAGTACCAGCAGCTTATTCCTCATCTAGAGGAAGGCCATGATCGAACAGCTATGGATCTCGAATTTCACCTTGAGGCCTCTAGAGCCAAACAGTTGCAGGTCAACGATGAAATTCGAAGGTTATCTCAGCTGAAGAAACGAATTGAGGAAGCCATTGATGGAGGATCCACTGAGATTCCTAAGTGGCTTGAGGAGAGTGATGAATTCCAAACACTCCTGAGGGATGTAGAGGGTTTCAAAAGCCTGAATATTCACGGTCACCGTGGTAGAAGCCCTTACTCGAGAAGAAGCCACAAAGCTTTAAGGGAAAGACTCAATCCTCTTCCTCCGAAACAAGTCAAGTCACCCGTGAATCCCAGTGTTAGCGAAACGCACTGGGTATGA

Transcript

OS493_032668-T1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00168	C2	C2 domain	Domain	Interproscan
PF00397	WW	WW domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000008	Domain	C2 domain	Interproscan
IPR001202	Domain	WW domain	Interproscan
IPR035892	Homologous_superfamily	C2 domain superfamily	Interproscan
IPR036020	Homologous_superfamily	WW domain superfamily	Interproscan
IPR051105	Family	WWC/KIBRA Hippo Pathway Regulators	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14791	BOMB/KIRA PROTEINS	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0016477	Biological Process	cell migration	Interproscan
GO:0019900	Molecular Function	kinase binding	Interproscan
GO:0035330	Biological Process	regulation of hippo signaling	Interproscan
GO:0046621	Biological Process	negative regulation of organ growth	Interproscan
GO:0060090	Molecular Function	molecular adaptor activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for OS493_032668-T1 global RNA-seq network