Detailed information of OS493_032497-T1 in Lophelia pertusa Gene info
Gene IDAnnotationScaffoldStartEndStrand
OS493_032497-T1SURVIVAL OF MOTOR NEURON-RELATED-SPLICING FACTOR 30-RELATEDscaffold_242581688588613-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06003SMN_TudorSurvival motor neuron protein (SMN), Tudor domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR002999DomainTudor domainInterproscan
IPR010304DomainSurvival motor neuron, Tudor domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR13681SURVIVAL OF MOTOR NEURON-RELATED-SPLICING FACTOR 30-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000381Biological Processregulation of alternative mRNA splicing, via spliceosomeInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006397Biological ProcessmRNA processingInterproscan
GO:0071011Cellular Componentprecatalytic spliceosomeInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for OS493_032497-T1 global RNA-seq network
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