Detailed information of OS493_032022-T1 in Lophelia pertusa Gene info
Gene IDAnnotationScaffoldStartEndStrand
OS493_032022-T1LONG-CHAIN-FATTY-ACID--COA LIGASEscaffold_232108253129611+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00501AMP-bindingAMP-binding enzymeFamilyInterproscan
PF13193AMP-binding_CAMP-binding enzyme C-terminal domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000873DomainAMP-dependent synthetase/ligase domainInterproscan
IPR020845Conserved_siteAMP-binding, conserved siteInterproscan
IPR025110DomainAMP-binding enzyme, C-terminal domainInterproscan
IPR042099Homologous_superfamilyANL, N-terminal domainInterproscan
IPR045311FamilyLong-chain fatty acid CoA synthetase, eukaryoticInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR43272LONG-CHAIN-FATTY-ACID--COA LIGASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0001676Biological Processlong-chain fatty acid metabolic processInterproscan
GO:0004467Molecular Functionlong-chain fatty acid-CoA ligase activityInterproscan
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0006631Biological Processfatty acid metabolic processInterproscan
GO:0016020Cellular ComponentmembraneInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for OS493_032022-T1 global RNA-seq network
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