Gene detail

Detailed information of OS493_030229-T1 in Lophelia pertusa Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
OS493_030229-T1	DEDICATOR OF CYTOKINESIS DOCK	scaffold_192	235872	281316	-

Gene Structure

More details in Jbrowse Sequence

CDS

OS493_030229-T1

ATGTCTGAGAGAAAAATAAGCAAAGCTCTCAGAAAGGATCGTGAATCTACAGTATCTGCAGTGGATATCAAGTCCCTTACATCCAGTGAAAGCACCTTTAGTTTAAGACCTTTGAAGGAGGTCGTCACTGGCATTTTACCCATCAGCTATGAAGACGAAATCGTGCAAAAACGAACACAGATATTGCGGGATCCTTTGCAGATTTTGTTGGTGTTTCCAGAGGACGATGTAATCGCTTTTGCTATTCCTCGCCAACTGAGGACGATACATTCTACAGTGCCGGGCGATGCTCTCTCCAGAGTATCAAACTTATTTACGCGAGAGTGTATCAGATTTTACACTGCCAATTGGAGCTGTATTGAAAACAAATATTCCAGCTATGGAGGCAGTTACCTCAAGCTTCCTAGACCATCTCCAGGAGAGGGACTTGAACCACAGGTTTTTGAGATGGATTGTGAAGAGGAGGTGGACTGTGGAAATCAGACAGTACTGATGAGCCCTTTACGAGAGAAAGGCATTTCCAAACAGGGCTACCTTACAAAGGCTCCATTTCATGGTGAAAGTAATGGTACACCGGGAGCAAAGAACTTCAAGCGCAGGTGGTTTCATCTGAAGCAGACATCAAACGATGGCTCTTACGTTTTAGAGTACAAAAAAGATGACGTCAACACAAGTATGGCCAGAGGAGTTCTGTATTTGGATGCATGTACTCACATCACTAAGGGTGTAAAAGGACGAATGTACGGCTTTGAGCTTCACGTCCAAGACAAACTCTACAGCTTGATCGCTGACAGTCAGTCAGACATGGACGCTTGGATTACGTCTCTGTGCAAAGTAACTGGAATCGATATGGACTCAGGAGGCAAAAGCAGCGGCTTCAACTTGATAGGCAAAATAAAAGGGCCAAAACTCCATCAGTCTCTGAGAGAAAGTCTTAAGAGCAGTAAACATCCAGAACTTCTTGAATTCGCGAAAGAAACCGAAGTTTTGAACGCGAAGCGAAGGAAGGATAGACGAAAAAAACTTTTCTCGCTCGTGCACGACTTGGACAACAACGGTACATGCGTGAACTACGACGATGCGAGAATAGACGCTGATGTATTCCAGCCACATTTTGGAATGCGTCTTGTTCTTGAGTGCGAGGATCTGAAGTTTCGACTGCTAAGAAATTTGCATGACGGCAGCGAAGTGAACATTGAACCGTTCTTTTTGTCGATTTCGTTGTTTGACTCTAAAGAAGGAGCGAAGATTTCGGAGGATTTCCACTGCGATCTCAACGATCCGACCACGGTGGACATGCTCAGAGGCTCAGAACTCATAGAGAATGGTCAAGCGAATGGGAATGGTGTAGATCACACGGAGCTTGATAGTCGGGAGTTGGAATACACTTCTCCAAGAAAGGCAATATTCTCTATAACTAATGCCCACCCAGAGGTCTACTTGGTGGTCAGAATAGAGAAAGTTTTACAAGGAAGCATAGGTTCATGTGTTGAACCGTACCTCAAGTCCGTGACACGAAAAAAGCTGCACAAAAGGCACACAAACTGGCCGAGATCTGCTGCAAGAGCCTGGGGCAGTATGGGATGCCGTTTGCCTGGACAGCCAGTGCATGGCAATAAACCGTTGTTCAACAGTGAAGGCGAATTTGAAAGCGGCGAGATTACTTCAATCTACAAACAGGACAGAGAAAAGCTCAGTGATGAGGAGATGATTAAACTCTTGTCAAACTACAGTGCTACAAAGGAAAGATTCAAACAACAGCTTATACCAGGAACCTTACACATTTCTGTCAAGAAATACGTTGAAGGAATACCAAATTGCATGACGTCATCGCTCGTTCCCGTCAAGCCTTGGGATGATTCACTGACCGTTCGTCCAACAGTGGAAGTGGATGAATTCTGTCAATCATGCCCAGAAGCTGCCCAACCACACACTTCCTACGTCAAACACCTCTACGTCTACCCTCTTGCACTCAATTATAGCAATCAAAAAGTTTTCTCCAAGGCAAGAAACATTTCTGTTAAGATCGAATTCAGGGATTCTGATGATGAAAATGCAAAGCCTCTCAAGTGTATATACAAGAAGAAAGGAAGCCGTGGTTTCACGACACACGCATACGCCGCCGTTGTTCATCATTGCACAAATCCCACATTTTACGAAGAGGTAAAAATCAATCTTCCCACTCAACTAACAGACAAGCATCACGTGTTCTTCACATTCCAACACATCGCGTGCGAACAGACCAAGAGTAGTAGTGGCACGGGATCAGTCAAGACCACCGGCCCTGAGTTGAAATGGGTGGACAGAGAGAAGCCGCTGTTTAAAGTGTGCACCAAACTGGTTTCCACTGTCAACACTCAGGATCCTGAAGTGGACAACTTTTTCCGTCATTGTCAGAGATTTGACGGGTCTCCTGCTACTGACATTGAAATGGTCAAGCTGTTAAAGGTCCTCAATGCGGTAAATGTTGGCACCGTGGCTAGGTTCCTGCCCGTCATCTTCAATCAACTCTTTCATATTCTCGTTGTCACTGGAAACGAGGACGTCTCACTGAACGTGGTCAGGGTGTTGATTCGCATTACGGCGCAACTTCACGGGGCTAGCCGACTTGAAGCTTTGAAATCTTACGTCAAGTACGTGTTCATCACTGAACAAGCTTTGGACAACAACAAGACGATTCACGAACAGCTTTCAAAATACCTGATGACAAGTCTGAAGCCTGGTGCTGATCCAGTGCTGGTCAACGAACTTATGACGCTCTCCTGGTTTTTCTTTGAGATCATTGTGAAAAGCATGGCGCAGACGCTCGTTCAATCGGACAAGTTAAAGGATGCAAATTTTCATTTGGCTTGCTTCACCAAGGACTGTTTCACATACTTGGACCGTGGATTTGTCTTTCAAATGATCAGTTATTATTCTGAGCAGTTTAAAGACTCTGATACACAGATGCTGGAATTCAAATTCGAGTTTCTTCAAGTTGTCTGTAATCACGAGCATTACATTCCACTTAATCTGCCTTTGGACGTCAGAACTCTCGGTGGTGTCCACGACTGTGAGCTGACAGATGATTACTGCAAGAGATATTTCCTCGTGGGACTGCTACTGCGAGAGGTCTCTTCCGCTCTTACACAGGGCCGGCACATTAGAAAGTTAGCTATCAGAGTGTTGAGAAACATGCTGGTTAAACATGAACTTGATGACCGCTATGAAGGAGAACAAAAGCAAGCTCGCATCTGCACCTTATACCTTCCCCTTCTCTCGGTCCTCCTGGATCACGCACCTCGTTTCCATGGCAGCAAGTACGACCTGTCGAACCCAGTCTTCGCGCAGCAAATGTCCCAGACCTCCTCCACCATGAATGTCCCTAACAGTGAATTTGGCGTGGATTCTAACCGCAGCTCAAGTTACTCTGCAGTAATGAAGCAAAGTCCCAGTGATTCACTGACGCCCCAGACAGCTGCGCCACTCAGGGAGGCTACCCAGATTGCTTTGCAAGTACCGTTGGATGAAGACGAGACAAAAGAGCTGCTCCTGTGTGCGTTGTACATCTTCAAGAATCTAGAGCAAGGTGTGATCCTGGATTGGTGGAGACAGATCCTGTCATCTTCAATTAAACGTCCTCACTGGCATCCAACAGTTCTGTATTTAATACAGCAGGACAAAAATTACAGCAAGTTTGCTGCAATTATTGATGTGTTTGATTTGCTCGAACTTGCTTTGACGCACTTTCAATTCGTTGGACAAGAAAAATTGCATCCCAAAGGTATCAATCTGGACATTCAAACTCGTATCTTAATGGAAGGAAATCTCGGGAATGAAGTCGGTCTTGTCGTGTTAGACACCATTGAGCTATTTTGTGGCCATTTTAAGTTTCACCTGGAACAAGATGAAGGTGACAATCTACTGATGAAGAAGGTGTTCAACGTACTGTTAAGCTTCCTACAGATTCCTCAGTCAGAGTTCATGATGAGACACGTGTTTGCGAGCCTGCGATCCTACATTAACAAGTTTCCTGCTGCATTATACAAGGGCAGTGCGAGTTACTGCGGAGATCTTTGTCGTGAGATTCTCAGCTGCTGCAACTCGAAGTTGGAAAGTCTTCGGAACCAGGCTTGCTCGTTTCTTTATCTGTTGATGAGAAGTAATTTTGAATTCACTGGAGCACAAGGCTGTGATCGAGTGCACTGGCAGGTTATCGTGGCGGTCTCTAAGCTGATGGCGAATGGTTTAAACCGCGCGGCAGTCAACAACTCTCTTCTGGCGCTGAAGAATTATGCTGTCGAGGATAAAGGAATGAAGCACTCGGCGTTTCCTTCTGAAGTGAAAGATCTAACGAAGAAGATTCACACTGTTTTACAGGCGACTGCGCAAATGAAGGTACGTGTCTACTGTTTGTTTGTTGGATTGTTTTCTAAACAACACTTTAAAATCGTTTAA

Transcript

OS493_030229-T1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00169	PH	PH domain	Domain	Interproscan
PF11878	DOCK_C-D_N	Dedicator of cytokinesis C/D, N terminal	Domain	Interproscan
PF14429	DOCK-C2	C2 domain in Dock180 and Zizimin proteins	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001849	Domain	Pleckstrin homology domain	Interproscan
IPR011993	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR016024	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR021816	Domain	Dedicator of cytokinesis C/D, N-terminal	Interproscan
IPR026791	Family	Dedicator of cytokinesis	Interproscan
IPR027007	Domain	C2 DOCK-type domain	Interproscan
IPR035892	Homologous_superfamily	C2 domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23317	DEDICATOR OF CYTOKINESIS DOCK	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005085	Molecular Function	guanyl-nucleotide exchange factor activity	Interproscan
GO:0007264	Biological Process	small GTPase-mediated signal transduction	Interproscan
GO:0043547	Biological Process	positive regulation of GTPase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for OS493_030229-T1 global RNA-seq network