| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| OS493_028921-T1 | RIBOSOMAL RNA METHYLTRANSFERASE | scaffold_171 | 468093 | 476223 | - |
| CDS | |||||
| OS493_028921-T1 | |||||
| Transcript |
| OS493_028921-T1 |
| Protein |
| OS493_028921-T1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01728 | FtsJ | FtsJ-like methyltransferase | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR002877 | Domain | Ribosomal RNA methyltransferase, FtsJ domain | Interproscan |
| IPR015507 | Family | Ribosomal RNA large subunit methyltransferase E | Interproscan |
| IPR029063 | Homologous_superfamily | S-adenosyl-L-methionine-dependent methyltransferase superfamily | Interproscan |
| IPR050082 | Family | Ribosomal RNA large subunit methyltransferase RlmE | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10920 | RIBOSOMAL RNA METHYLTRANSFERASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0001510 | Biological Process | RNA methylation | Interproscan |
| GO:0005739 | Cellular Component | mitochondrion | Interproscan |
| GO:0008168 | Molecular Function | methyltransferase activity | Interproscan |
| GO:0008173 | Molecular Function | RNA methyltransferase activity | Interproscan |
| GO:0008650 | Molecular Function | rRNA (uridine-2'-O-)-methyltransferase activity | Interproscan |
| GO:0032259 | Biological Process | methylation | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for OS493_028921-T1 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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