Gene detail

Detailed information of OS493_026940-T1 in Lophelia pertusa Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
OS493_026940-T1	SERINE PROTEASE INHIBITOR	scaffold_142	499104	511686	-

Gene Structure

More details in Jbrowse Sequence

CDS

OS493_026940-T1

ATGTACACAAGTTATGTTCAAGGACATCATGAACAACATGTGGTTTCTTGTGTAGATAGGCTGACTGCAGATGTCACACCAGCTTGTACTTCACAAGGATTGGATTCAAAACCTAAAGCATTGAAATGTTGTAGAAAACTGGATTCTGATGATTTGAAATGCAAAAGAACTTGCCGACAGGATCTTCAGTCACAGAAAAGTGCAACGACTCTGATTTCAAATCTCGTCAAAGCTTGCGGACAACCATTTGCTCAAAACAATACAAAGCGCAATGCGTTTTGGACTTGTCTTCTGGCCAATGCAGACAAAAGGCCTCCTCCAGCTTGTCCAACAGGGACGCCACCACCTCCGTTACCAGTTTCAGGAATTGATGGTGCAAAGCTCCAGTGCTGCTCAAAAGCTACAGAGTCTCGTTGCTGGCGTCGGTGTGTCCAGATGTACACGTCCAAGTGGGGGAAAAATCAGAACTGGGAGTCGTTTGACAGAGAGTGTTCATACAATCCCAAAGAGATCAGTATGATGAACTGCTTAGCGGATGTGACTGAACCATGCCAGTTAGGATGCTCGGGTCTCAGTTTCTGTACAAACTTCAACAACAGGCATACAGAACTGTTCCGCAGCTGTAACAGCAAGTCAGACTATGGAGCTAAGAGTCACATGCAGGAGTGGAAAAAAGGCTTCATTCAAATGCCCAACATTGTGATCCCAATTCAGGACATCAAAAAGTGCCTCCCTGATACGTGGAAGGCCATTGCTTGTGTACTCCAGATTAAGCCATGCAGCATCAAATCTCACAGGAGTACCATCTGTAGACCCGACTGTGTTCAAATTCTACAGAAGTGTCGCAATTCAAGTACCCACCTTGCATCGTTATCAGCAGAGGATGTTTGTGATGAACTCTCTCCTCCTGAGAAGAAAGCTCCATGTATTTCCCTCGAGGAATATCTTGTACCCAGCAAGTATACTGATGTGACTGATGAAGTAACTCACCCTTGCAACCCAAACCCATGCAAGGAGAACCAAGTGTGTGATATCAACAGAAGTTGCTATGGAGCCATACTTGACAGGTGTCAATCACACACTTGTGTGCCAGGGTGCCCACTTGGTGATGCTTCAAGTTTCCTTGTGCGAGTGGGAGAGTATGCAAGGGTGCCTGTTGCCACTGGAAGAGAAGGCTGCTTCAGGATATGCCACTGTGATGGTACATCAAAACTCAGCAACTGTATAAACCTGGAGTGTGTTCGACGAAAGCCGTGCAGTCTTCGAGGAAAAATCAAAAATGATGGTGAAATGTTTATGGATGACTGCAATCTGTGCACATGTTTTTCGGAAGAGCTGACCTGCACAAAGAGGCATTGTCCAGAGTCTGTATTTTCACCTGAATACAATGCAAGCCGACCCAAGCGCAATCAAACACCAGATAATGTGTCCATGGATACAGACTCAATCACGACTCTTCCGTGTGCCTGTGATAATGATTATCATCCAGTGTGTGGCAGTGATGCCAAGACCTACCCTAATTCCTGTGTGGCTCGGTGTATTGGATTAAAAGATTCTCAGCTGAAGAAGGGCAATTGTGCTTCCATTGATCCTTGTCAACCAAACCCCTGTGCACCGGATGAAAAGTGTATTGTTGAAAGAAAGACTTGTCTGTCCATTACTGATCCATGCAACCAATATTATTGTGTCTCTGAAGGAAAATACTGCAGTGATCTTCAGTTGGACCCAGTCTGTGACTCGGACAACAATCAGCACCCAAACCTCTGCTCGTTGCAGTTCAACCGCAAGAGCCTGGCATACAGAGGTTTCTGCAAGGATGAATGCAAACCACCCTCCCCTCCCGTGTGCGGGGTGAATGGGGAGACGTACTCCAGCACATGCGCAGCTCACTCAGCGAGAGTCATCGTTGATTATCAAGGCCAGTGTAAAGCTGTGGGTGGCGGATATGAAGATGAACCAAGGTGTGATAATGTCAAGTGTCCCGCGTTGAAACCGTCTCACTGCAAAGGAATTATTCCACCAGGGGCCTGCTGTCCACATTGCGCTGCGGAAGTTCGAATTTTGTACAGTTTAAAACAACTGTTTAAAAACCGAGAAGGATTCAGCAGACACGAGACTGTCACACTGGAGCAAGTTTTCCTGATCCTACGGCGGCATATTTCTACTACCGAGTGTGATCTGTTTGGATACCACAGCCTCGAAGGCGACATAGTTGTGTTGGTGATGGCCGTCACGTCCAAACCAACAAAGCTTCAGGTGGAAGCTTGCAATCGTGAGGCTCAAAAGATCGAAGCCTTTGTAAATACGGCGACTCCATCCTTCACATCAGACATTGTGCTCTCAGCACTAAAAGGAGCACGCTCGCGCGTGCCCTCGTTATCAAGTAAACCGGACAAACCGGTTCCCACCTCTCACAAGAGTAAAGGCAGTCGGGTGAACAATGCTCTTATTGCAACAGTACTGCCTATCATCATGTTACCAGTTATGCTACGAACAGGTAGAAGTTAA

Transcript

OS493_026940-T1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07648	Kazal_2	Kazal-type serine protease inhibitor domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001007	Domain	VWFC domain	Interproscan
IPR002350	Domain	Kazal domain	Interproscan
IPR036058	Homologous_superfamily	Kazal domain superfamily	Interproscan
IPR039016	Family	Reversion-inducing cysteine-rich protein with Kazal motifs	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13487	SERINE PROTEASE INHIBITOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004866	Molecular Function	endopeptidase inhibitor activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0008191	Molecular Function	metalloendopeptidase inhibitor activity	Interproscan
GO:0030198	Biological Process	extracellular matrix organization	Interproscan
GO:1904684	Biological Process	negative regulation of metalloendopeptidase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for OS493_026940-T1 global RNA-seq network