Detailed information of OS493_025191-T1 in Lophelia pertusa Gene info
Gene IDAnnotationScaffoldStartEndStrand
OS493_025191-T1MYOSIN LIGHT CHAIN 1, 3scaffold_12111188301132236-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02931Neur_chan_LBDNeurotransmitter-gated ion-channel ligand binding domainFamilyInterproscan
PF13499EF-hand_7EF-hand domain pairDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR002048DomainEF-hand domainInterproscan
IPR006202DomainNeurotransmitter-gated ion-channel ligand-binding domainInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR036734Homologous_superfamilyNeurotransmitter-gated ion-channel ligand-binding domain superfamilyInterproscan
IPR050230FamilyCalcium-Regulated Muscle Contraction and Cellular ProcessInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR23048MYOSIN LIGHT CHAIN 1, 3Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005230Molecular Functionextracellular ligand-gated monoatomic ion channel activityInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016460Cellular Componentmyosin II complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for OS493_025191-T1 global RNA-seq network
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