Detailed information of OS493_024963-T1 in Lophelia pertusa Gene info
Gene IDAnnotationScaffoldStartEndStrand
OS493_024963-T1DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBERscaffold_119466294473055-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06777HBBHelical and beta-bridge domainDomainInterproscan
PF13307Helicase_C_2Helicase C-terminal domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001945FamilyRAD3/XPD familyInterproscan
IPR006555DomainATP-dependent helicase, C-terminalInterproscan
IPR010643DomainHelical and beta-bridge domainInterproscan
IPR013020FamilyATP-dependent helicase Rad3/Chl1-likeInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR045028FamilyHelicase superfamily 1/2, DinG/Rad3-likeInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR11472DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBERInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003678Molecular FunctionDNA helicase activityInterproscan
GO:0003684Molecular Functiondamaged DNA bindingInterproscan
GO:0004386Molecular Functionhelicase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006139Biological Processnucleobase-containing compound metabolic processInterproscan
GO:0006289Biological Processnucleotide-excision repairInterproscan
GO:0006366Biological Processtranscription by RNA polymerase IIInterproscan
GO:0016818Molecular Functionhydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydridesInterproscan
GO:0045951Biological Processpositive regulation of mitotic recombinationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for OS493_024963-T1 global RNA-seq network
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