Detailed information of OS493_023265-T1 in Lophelia pertusa Gene info
Gene IDAnnotationScaffoldStartEndStrand
OS493_023265-T1OXIDOREDUCTASE, SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY (AFU_ORTHOLOGUE AFUA_5G02870)scaffold_101929026937106+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01288HPPK7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)DomainInterproscan
PF02152FolBDihydroneopterin aldolaseDomainInterproscan
PF13561adh_short_C2Enoyl-(Acyl carrier protein) reductaseDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000550Domain7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPKInterproscan
IPR002347FamilyShort-chain dehydrogenase/reductase SDRInterproscan
IPR006157DomainDihydroneopterin aldolase/epimerase domainInterproscan
IPR035907Homologous_superfamily7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamilyInterproscan
IPR036291Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR043133Homologous_superfamilyGTP cyclohydrolase I, C-terminal/NADPH-dependent 7-cyano-7-deazaguanine reductaseInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR43639OXIDOREDUCTASE, SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY (AFU_ORTHOLOGUE AFUA_5G02870)Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003848Molecular Function2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activityInterproscan
GO:0004150Molecular Functiondihydroneopterin aldolase activityInterproscan
GO:0006760Biological Processfolic acid-containing compound metabolic processInterproscan
GO:0009396Biological Processfolic acid-containing compound biosynthetic processInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for OS493_023265-T1 global RNA-seq network
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