| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| OS493_022538-T1 | PENTRAXIN | scaffold_93 | 1100762 | 1136505 | + |
| CDS | |||||
| OS493_022538-T1 | |||||
| Transcript |
| OS493_022538-T1 |
| Protein |
| OS493_022538-T1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00147 | Fibrinogen_C | Fibrinogen beta and gamma chains, C-terminal globular domain | Domain | Interproscan |
| PF00354 | Pentaxin | Pentaxin family | Domain | Interproscan |
| PF00629 | MAM | MAM domain, meprin/A5/mu | Domain | Interproscan |
| PF00754 | F5_F8_type_C | F5/8 type C domain | Domain | Interproscan |
| PF06439 | 3keto-disac_hyd | 3-keto-disaccharide hydrolase | Domain | Interproscan |
| PF07534 | TLD | TLD | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000421 | Domain | Coagulation factor 5/8 C-terminal domain | Interproscan |
| IPR000998 | Domain | MAM domain | Interproscan |
| IPR001759 | Family | Pentraxin-related | Interproscan |
| IPR002181 | Domain | Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain | Interproscan |
| IPR006571 | Domain | TLDc domain | Interproscan |
| IPR008979 | Homologous_superfamily | Galactose-binding-like domain superfamily | Interproscan |
| IPR010496 | Domain | 3-keto-disaccharide hydrolase | Interproscan |
| IPR013320 | Homologous_superfamily | Concanavalin A-like lectin/glucanase domain superfamily | Interproscan |
| IPR014716 | Homologous_superfamily | Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1 | Interproscan |
| IPR020837 | Conserved_site | Fibrinogen, conserved site | Interproscan |
| IPR030476 | Conserved_site | Pentaxin, conserved site | Interproscan |
| IPR036056 | Homologous_superfamily | Fibrinogen-like, C-terminal | Interproscan |
| IPR051360 | Family | Neuronal Pentraxin and Related | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR19277 | PENTRAXIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0016020 | Cellular Component | membrane | Interproscan |
| GO:0016787 | Molecular Function | hydrolase activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for OS493_022538-T1 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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