Detailed information of OS493_022533-T1 in Lophelia pertusa Gene info
Gene IDAnnotationScaffoldStartEndStrand
OS493_022533-T1PROLYL-TRNA SYNTHETASEscaffold_9310585751070711+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00587tRNA-synt_2btRNA synthetase class II core domain (G, H, P, S and T)DomainInterproscan
PF03129HGTP_anticodonAnticodon binding domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR002314DomainAminoacyl-tRNA synthetase, class II (G/ P/ S/T)Interproscan
IPR002316FamilyProline-tRNA ligase, class IIaInterproscan
IPR004154DomainAnticodon-bindingInterproscan
IPR004499FamilyProline-tRNA ligase, class IIa, archaeal-typeInterproscan
IPR006195DomainAminoacyl-tRNA synthetase, class IIInterproscan
IPR033721DomainProlyl-tRNA synthetase, catalytic domainInterproscan
IPR036621Homologous_superfamilyAnticodon-binding domain superfamilyInterproscan
IPR045864Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR43382PROLYL-TRNA SYNTHETASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0004827Molecular Functionproline-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0006433Biological Processprolyl-tRNA aminoacylationInterproscan
GO:0017101Cellular Componentaminoacyl-tRNA synthetase multienzyme complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for OS493_022533-T1 global RNA-seq network
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