| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| OS493_020189-T1 | THROMBOSPONDIN | scaffold_73 | 1605061 | 1614561 | + |
| CDS | |||||
| OS493_020189-T1 | |||||
| Transcript |
| OS493_020189-T1 |
| Protein |
| OS493_020189-T1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00084 | Sushi | Sushi repeat (SCR repeat) | Domain | Interproscan |
| PF02412 | TSP_3 | Thrombospondin type 3 repeat | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000436 | Domain | Sushi/SCR/CCP domain | Interproscan |
| IPR003367 | Repeat | Thrombospondin, type 3-like repeat | Interproscan |
| IPR028974 | Homologous_superfamily | TSP type-3 repeat | Interproscan |
| IPR035976 | Homologous_superfamily | Sushi/SCR/CCP superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10199 | THROMBOSPONDIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005509 | Molecular Function | calcium ion binding | Interproscan |
| GO:0007155 | Biological Process | cell adhesion | Interproscan |
| GO:0062023 | Cellular Component | collagen-containing extracellular matrix | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for OS493_020189-T1 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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