Detailed information of OS493_019901-T1 in Lophelia pertusa Gene info
Gene IDAnnotationScaffoldStartEndStrand
OS493_019901-T1TRANSDUCIN BETA-LIKE 3scaffold_71930413932169+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
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InterPro
InterPro termTypeDescriptionSource
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR19854TRANSDUCIN BETA-LIKE 3Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000472Biological Processendonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0000480Biological Processendonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0030686Cellular Component90S preribosomeInterproscan
GO:0034511Molecular FunctionU3 snoRNA bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for OS493_019901-T1 global RNA-seq network
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