| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| OS493_016700-T1 | TRANSPORT AND GOLGI ORGANIZATION PROTEIN 6 FAMILY MEMBER | scaffold_52 | 26503 | 29738 | + |
| CDS | |||||
| OS493_016700-T1 | |||||
| Transcript |
| OS493_016700-T1 |
| Protein |
| OS493_016700-T1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02985 | HEAT | HEAT repeat | Repeat | Interproscan |
| PF10304 | RTP1_C2 | Required for nuclear transport of RNA pol II C-terminus 2 | Repeat | Interproscan |
| PF10363 | RTP1_C1 | Required for nuclear transport of RNA pol II C-terminus 1 | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000357 | Repeat | HEAT repeat | Interproscan |
| IPR011989 | Homologous_superfamily | Armadillo-like helical | Interproscan |
| IPR016024 | Homologous_superfamily | Armadillo-type fold | Interproscan |
| IPR019414 | Domain | RNA polymerase II assembly factor Rtp1, C-terminal domain 2 | Interproscan |
| IPR019451 | Domain | RNA polymerase II assembly factor Rtp1, C-terminal | Interproscan |
| IPR021133 | Repeat | HEAT, type 2 | Interproscan |
| IPR039600 | Family | TANGO6/Rtp1 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR20959 | TRANSPORT AND GOLGI ORGANIZATION PROTEIN 6 FAMILY MEMBER | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0009306 | Biological Process | protein secretion | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for OS493_016700-T1 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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