Detailed information of OS493_016591-T1 in Lophelia pertusa

Genomic Location: scaffold_51:768757...792925
NR annotation: KAJ7379357.1, Lsd1/2 complex PHD finger containing protein Phf2 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q3UWM4Lysine-specific demethylase 7A OS=Mus musculus OX=10090 GN=Kdm7a PE=1 SV=2
Q6ZMT4Lysine-specific demethylase 7A OS=Homo sapiens OX=9606 GN=KDM7A PE=1 SV=2
Q08D35Lysine-specific demethylase 7A OS=Xenopus tropicalis OX=8364 GN=kdm7a PE=2 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|PHD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02373JmjCJmjC domain, hydroxylaseDomainInterproscan
PF17811JHDJumonji helical domainDomainInterproscan
PF00628PHDPHD-fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR003347DomainJmjC domainInterproscan
IPR050690FamilyJHDM1 Histone DemethylaseInterproscan
IPR041070DomainJumonji, helical domainInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR019786Conserved_siteZinc finger, PHD-type, conserved siteInterproscan
IPR001965DomainZinc finger, PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23123PHD/F-BOX CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003712Molecular Functiontranscription coregulator activityInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0006482Biological Processprotein demethylationInterproscan
GO:0032452Molecular Functionhistone demethylase activityInterproscan

Expression pattern
 Expression trend for OS493_016591-T1 global co-expression network
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