Detailed information of OS493_015842-T1 in Lophelia pertusa Gene info
Gene IDAnnotationScaffoldStartEndStrand
OS493_015842-T1DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBERscaffold_4811117901121529+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13307Helicase_C_2Helicase C-terminal domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR006555DomainATP-dependent helicase, C-terminalInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR036600Homologous_superfamilyPaired amphipathic helix superfamilyInterproscan
IPR045028FamilyHelicase superfamily 1/2, DinG/Rad3-likeInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR11472DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBERInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003678Molecular FunctionDNA helicase activityInterproscan
GO:0004386Molecular Functionhelicase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006139Biological Processnucleobase-containing compound metabolic processInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0010569Biological Processregulation of double-strand break repair via homologous recombinationInterproscan
GO:0016818Molecular Functionhydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydridesInterproscan
GO:0032508Biological ProcessDNA duplex unwindingInterproscan
GO:0045910Biological Processnegative regulation of DNA recombinationInterproscan
GO:0070182Molecular FunctionDNA polymerase bindingInterproscan
GO:0090657Biological Processtelomeric loop disassemblyInterproscan
GO:1904430Biological Processnegative regulation of t-circle formationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for OS493_015842-T1 global RNA-seq network
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