Detailed information of OS493_013997-T1 in Lophelia pertusa Gene info
Gene IDAnnotationScaffoldStartEndStrand
OS493_013997-T1AAA-FAMILY ATPASEscaffold_39571153571994-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00004AAAATPase family associated with various cellular activities (AAA)DomainInterproscan
PF02359CDC48_NCell division protein 48 (CDC48), N-terminal domainDomainInterproscan
PF02933CDC48_2Cell division protein 48 (CDC48), domain 2DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR003338DomainCDC48, N-terminal subdomainInterproscan
IPR003959DomainATPase, AAA-type, coreInterproscan
IPR004201DomainCDC48, domain 2Interproscan
IPR009010Homologous_superfamilyAspartate decarboxylase-like domain superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR029067Homologous_superfamilyCDC48 domain 2-like superfamilyInterproscan
IPR050168FamilyAAA ATPase domain-containing proteinInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR23077AAA-FAMILY ATPASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for OS493_013997-T1 global RNA-seq network
TOP