| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| OS493_011839-T1 | HUNTINGTON DISEASE PROTEIN | scaffold_30 | 2242596 | 2277723 | + |
| CDS | |||||
| OS493_011839-T1 | |||||
| Transcript |
| OS493_011839-T1 |
| Protein |
| OS493_011839-T1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF12372 | Htt_N-HEAT | Huntingtin, N-terminal HEAT | Repeat | Interproscan |
| PF20925 | Htt_bridge | Huntingtin, bridge | Repeat | Interproscan |
| PF20927 | Htt_C-HEAT | Huntingtin, C-terminal HEAT | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR011989 | Homologous_superfamily | Armadillo-like helical | Interproscan |
| IPR016024 | Homologous_superfamily | Armadillo-type fold | Interproscan |
| IPR021133 | Repeat | HEAT, type 2 | Interproscan |
| IPR024613 | Repeat | Huntingtin, N-terminal, HEAT repeats 2 | Interproscan |
| IPR028426 | Family | Huntingtin family | Interproscan |
| IPR048412 | Repeat | Huntingtin, bridge | Interproscan |
| IPR048413 | Repeat | Huntingtin, C-terminal HEAT repeats | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10170 | HUNTINGTON DISEASE PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005737 | Cellular Component | cytoplasm | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for OS493_011839-T1 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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