Detailed information of OS493_011343-T1 in Lophelia pertusa Gene info
Gene IDAnnotationScaffoldStartEndStrand
OS493_011343-T1BETA-ELIMINATING LYASE-LIKE PROTEIN-RELATEDscaffold_2830048053007034-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01212Beta_elim_lyaseBeta-eliminating lyaseDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001597DomainAromatic amino acid beta-eliminating lyase/threonine aldolaseInterproscan
IPR011166FamilyBeta-eliminating lyase familyInterproscan
IPR015421Homologous_superfamilyPyridoxal phosphate-dependent transferase, major domainInterproscan
IPR015422Homologous_superfamilyPyridoxal phosphate-dependent transferase, small domainInterproscan
IPR015424Homologous_superfamilyPyridoxal phosphate-dependent transferaseInterproscan
IPR018176Conserved_siteTryptophanase, conserved siteInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR32325BETA-ELIMINATING LYASE-LIKE PROTEIN-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0006520Biological Processamino acid metabolic processInterproscan
GO:0009072Biological Processaromatic amino acid metabolic processInterproscan
GO:0016829Molecular Functionlyase activityInterproscan
GO:0016830Molecular Functioncarbon-carbon lyase activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for OS493_011343-T1 global RNA-seq network
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