Gene detail

Detailed information of OS493_010262-T1 in Lophelia pertusa Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
OS493_010262-T1	TENEURIN AND N-ACETYLGLUCOSAMINE-1-PHOSPHODIESTER ALPHA-N-ACETYLGLUCOSAMINIDASE	scaffold_25	447494	468139	+

Gene Structure

More details in Jbrowse Sequence

CDS

OS493_010262-T1

ATGGCCAATGGCAAGCTGGCTGGTGACCCACTCTTAACCCAGTATGACTTAAAGGACCAGTCAGATGGCGCACTACCTTTGGTATTACGAAGAACTTACAGTCCACTGCTTTCTAAGCGAAGAGAGAAGGGCGCTTTTGGTGTTGGTTGGATGGCGTCATGGTGGGAGGCTAAAGTAACACAGATTACACCAGAAACGATTAAAATTGTTCGTTTACGCGAAGAGTTAGTGTTTGAGGCAGAATCAGCTGGGCTCTACATGTCATTGGATGGAAAGAAAGTTACTGTTAACAATACAGAGATCCAAAGAGGTAACGAGACGATCACGATCGAATATGCACAAAACCAACCCTCGACTTTCACACATTCGTCCGGAAGAAAAATCTCTGTGAAATACAACGACAATGGATTTGTTCGAGAGACGAGATTTGAAGACGGATCCGGTAAAAAACGAAGATGTTTCTATACATATGATTGGGACACATCTACACTGCTGTCTATCAGCACCGGTGAACAAACTACACGTTATGCGTACAGCTTCCACGGCGACCTAACAAGTATTGTTTACCCCACATCGTCTGCCGTCAAATACGCTTGGAACCAACATGGATTCTTGAGTAATATAACAGGTTTTAACCAGAAAAACAAGTTTATCCAGGGAGTGTATTTCTCGTACGACTGGAATGGTAGGGTTACTATGTCCAGACTTCCACAAGGCGACTCGGCCGTGCTCGTGTTTAACGAAGAAGCGAAGATGATGGATATCATAGGCGGTGGGTTTGGCGATGTACGATTTGAGAGTGTTCAAACTGATGACCAAGTCGTGAGAACCATAAAGCAAGGCGACCAGGTTGTAATGAGCAGAACATTCAATATCAAGACGAACATCATGTCTGTTGTGGACGCTAATGACCACGAAACACAATTCCTATTACGGAAAAACGGAGATGTTCTAAACACGACAGATCCCGGTGGCTTCGTTTATCAGAATATTTACGACAAAAAAGGCAAACTGGTCAAGTTCATATACCCGGATGACAAGACCGAACTTTCTGATTATGATGGCTCCGGAAGACTGGTAAAGTTTACTGGTAGAGCTGGAAAGGAAATCAAGTTCGAGTACAATGAAAATGACAAAATCGTCAAAAAAGATGTTGATAATCTTGGCTCTTCGTATTTCCTTCACGATGACAGCGGAAACATGGTTCAAGCAACAAACGATATCGGAACAATAAACATTGCTTACGACAGAGAAAACAGGCCTACCAGTATCATTTATCCAAACGGTCAGCGGATCACGTACAAATTCAATGATCTCCAGCGTCGTGTGGCACTAAATGAGACAGTCTCTGGGCTAAGCCTGGCTTACACGTATGACAGGCTTTACCGGTTATCTGAGGTCGTACGTGTAAACCCAAGCGGTAGACGTGATATCCTATTAAAGTTAGAGTACAACTCAAAGGGAATGGTGTCTAAACGTGTTCTTGGAAATGGAGCATATTCTGAGTACGTTTTAGATCCAATTAACTTCAAACTGTCACGTATGGTGAATTATTTTCCAAATGGAAGCGTCTCTTCGTATTTTGGATACAATTATGACAGGAAGGGGCGCATCATTCAACTAAATACAACGTCTGGGAACTGGCGGTATAAATTTGATGCAGCTTCGCAGCTCATACAATCAACGGATCCACGAGGCAAAGTTGTTCGTTACACCTACGACAAACGAAAAAACCGAGTTGTCGTCTCAGAAGAGCCTGGTAACAAGACTCTGTACGCTGTAAACAAAGTTAACCAGTACAGCACGGCAGGGAATTATGATATTAAATACGACATGAATGGAAATATGGAGGAGAAGACGAACAGGAATGTGCGGAACGACAGTGTCAAATTCAAATTTAGTTCCGAGGATTTCCTGCTGCAAGCTGAAACTCCAAACAAAAGATGTAACTATGTCTATGATGGCTTGGGAAACTTGTACAAGAAGTCATGCGGTCAAACAGAAGTGCAATACGTCATCGATCCGTTCGGTAATCCAGGAGCTGATATTATTGGCCAGATTTCTGGTGGAAATATAACACAGTTTGTCCACTGTGAAGAGCTTGGATTGGTTGCTTTGATTGACATGAATGGTGACGTGTATTATTACGAGTTTGACGGTCTGGGGTCTGTCGTAGGAGTACTGGGTCCAAGTGGCGATCGTACCAATCGCTACAGCTATGATCCGTTTGGCAGTATGTTAGAAGTCGATGAAGGGTTGCCGCAGGACTTCACGTTTATTGGTCAATGGGGTGTGATTGTGAACCGCGAACTTAGGGATAGCTACTGGATGCGATCCAGACACTACGATGCGCAGCTTGGAAGATTTCTTAGCCTTGATCCACTTGGTTTTAAAGGGAAAAGTATCAATCTTTACTCGTACGCAGCCAACAATCCCGTGATGCTGAAGGACCCTCGAGGGCGATTTATTGCTACAGTCGGCGCAGGCTTTGTAAGCGCAGGGGTGGATGTTGCTGCTTATATGGCAGCTCAGAAATTGAAAAATGAAGAAATTACCATGGGAGGAGTTGTGTCAACTGCAGTAACCGGTTTTGTCTCGTCTTTTTTCAAAAAAGGAAAAATCGTTGTCGCGGCTATTTCTGGTGTCGGAAGCTCTATCATAAGGCAACGGATTGATGATGGTAGCGTTAATGTGGGGAAGGCATTGGAAGATGGAATCAATAGCGCAATTGCCGCAGCCATTCCTGGATTCAACGGTTTCGTCGGAAAGACTCTTAAAAACAGATATGCGCCGACAGCAAAGGATATAACAAAATGGGGAAAGATTGTCCTCAAAATCTCCATCACCTGGGTCCGGTCCTGGGATCCGAACGACATGATTGGTCCTCCAGGATACGGAAACGCGCGTTTTATTTCATTGAAGACGCCGCTGACCTACAAGATCAGGTTTGAGAATGATGCTAATGCAACAGCTCCTGCCCAACACGTGATCGTTCTGCACACGTTGGACCAAGACTTGGACATTCGCACATTTAGAATTACAGGTTTTGGATTTGGCAGCTTTACTAAAACGTTCACGAGTTCAGTAGCCTCTGTTCAGGAAACAATCAACCTTGTGTCAGAGAAGAATATCTATGTACGAGTGCTTGCCGGTATAGATGTTATGACTCGTGAAGCACGCTGGGAATTTCAGAGCCTCGACCCTGAGACAGGCGAGGCTCCTGATGATCCACGAACAGGCTTCCTTCCACCAAACAATGGCACGACAGGTCAAGGATATGTGACTTTCTCTGTTCGCCTTAAGAAGAACGTGCCATCTTTAGCAAGGATTGACGCGAAAGCCAGTATCTACTTTGACAAGAACGAACCGATCGATACTCCTCCAATCTTTAACACGATTGACAGTTTGAGCCCCTCCTCCAATATATCTGTTATAAGTGACGTCATGAAGGCTGGTAAGCTGGTCGTGGATATCGATACACAAGACGAGGGGTCTGGGGTCCAGTCGGTTGACATGTTCTATCAAATCTCAGAGGGGAATGAGCCGCTCCAAGACCAATCTCTACTCCCTCTACTGTCCGGTATAACAGACGATACAGCTTTCCTGCCCCTCCCCCCTGGGAAGACGTATACACTTTTGGCTTTGGCTGTTGATCACGTGGGTAACAGGCAGCCAATGGACTGGAATCGAGCAATCACAGTGGACTTTACTCTTCCGAAACCTTCCTGTGAACGACTGAACAACTGCTCCGGCCATGGAAATTGCTCTGTTCTCAATCTCTGTGTCTGTGAAGACGGATTTTATGAAGTTAACTGCTCACTCGATTTTCCTTTACGCTTTGAGACTCCGGTCATCAACTCTATGTACAGCGACACCAATGAAGACATGCGCACTCAGTTGTACCTCTCTGCTTTTATCCCCGATATTGAAAACAGCGGCTACAATGAAAATTTCAAACTGAAACTCTACATCGATGAAGTTCCTCAAGAATTCACTTTTAACAAAGGAAACAAGAGTGCGAATCGCGTCATTTTAGAGCGTGAAGATTTCGGAGATATTTGGATGACGCCCCAAAAAGACTTTTCAGGCCTTGTCAAACTGAACATCACCGCGGAAGCCACCACGCCAAGGGAAACAAAAATCGCCAGCAGCCAAATTGAAATAAAGATCAAAGCCGTTGCTGACATGCCGTTTCTTAATGTTAGAGTTCCTTGTTATCATTGGAACAGCAGTGAAAAGATCATACCAGTATCTCTAGAAAGCCACTTGAATGACCGTGATGGTTCCGAGAATCTGACGATTATCTTCTCGGGTTTACCGAGTGATTATCGATCAGTTTACGAGAATGTCACGAAATTTGTAAACGGCAGTAATGATACAGCTCCGCATAACTCGCCTGGTTGGTTTATTTCGTTTAACGGGACGTTAAAACCATTCGTTCTGAGTGTAGTTGCAATAGCAATGGAAAGATCCAACGGAGACAAAGCAAACAGGACGGTCGCTGTTGATGTGGCATTTTGTGGTAAGTTTCATGACATTGGCGTTTTAATTGCTGAAAATGTTTTAGGATGTCCTTATCCACAGTGA

Transcript

OS493_010262-T1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05593	RHS_repeat	RHS Repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000742	Domain	EGF-like domain	Interproscan
IPR006530	Repeat	YD repeat	Interproscan
IPR022385	Domain	Rhs repeat-associated core	Interproscan
IPR031325	Repeat	RHS repeat	Interproscan
IPR051216	Family	Teneurin domain-containing protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11219	TENEURIN AND N-ACETYLGLUCOSAMINE-1-PHOSPHODIESTER ALPHA-N-ACETYLGLUCOSAMINIDASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0007157	Biological Process	heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules	Interproscan
GO:0042803	Molecular Function	protein homodimerization activity	Interproscan
GO:0043005	Cellular Component	neuron projection	Interproscan
GO:0046982	Molecular Function	protein heterodimerization activity	Interproscan
GO:0048666	Biological Process	neuron development	Interproscan
GO:0050839	Molecular Function	cell adhesion molecule binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for OS493_010262-T1 global RNA-seq network