Detailed information of OS493_009935-T1 in Lophelia pertusa Gene info
Gene IDAnnotationScaffoldStartEndStrand
OS493_009935-T1CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 2scaffold_24913425933880-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07521RMMBLZn-dependent metallo-hydrolase RNA specificity domainMotifInterproscan
PF10996Beta-CaspBeta-Casp domainDomainInterproscan
PF16661Lactamase_B_6Metallo-beta-lactamase superfamily domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001279DomainMetallo-beta-lactamaseInterproscan
IPR011108DomainZn-dependent metallo-hydrolase, RNA specificity domainInterproscan
IPR022712DomainBeta-Casp domainInterproscan
IPR027075FamilyCleavage and polyadenylation specificity factor subunit 2Interproscan
IPR035639DomainCPSF2, metallo-hydrolase domainInterproscan
IPR036866Homologous_superfamilyRibonuclease Z/Hydroxyacylglutathione hydrolase-likeInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR45922CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 2Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005847Cellular ComponentmRNA cleavage and polyadenylation specificity factor complexInterproscan
GO:0006378Biological Processobsolete mRNA polyadenylationInterproscan
GO:0006398Biological ProcessmRNA 3'-end processing by stem-loop binding and cleavageInterproscan
GO:0098789Biological Processobsolete pre-mRNA cleavage required for polyadenylationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for OS493_009935-T1 global RNA-seq network
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