| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| OS493_007090-T1 | SPLICEOSOME ASSOCIATED PROTEIN 114/SWAP SPLICING FACTOR-RELATED | scaffold_15 | 1210961 | 1217691 | - |
| CDS | |||||
| OS493_007090-T1 | |||||
| Transcript |
| OS493_007090-T1 |
| Protein |
| OS493_007090-T1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01805 | Surp | Surp module | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000061 | Domain | SWAP/Surp | Interproscan |
| IPR035967 | Homologous_superfamily | SWAP/Surp superfamily | Interproscan |
| IPR045146 | Family | Splicing factor 3A subunit 1 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR15316 | SPLICEOSOME ASSOCIATED PROTEIN 114/SWAP SPLICING FACTOR-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000381 | Biological Process | regulation of alternative mRNA splicing, via spliceosome | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0005686 | Cellular Component | U2 snRNP | Interproscan |
| GO:0006396 | Biological Process | RNA processing | Interproscan |
| GO:0045292 | Biological Process | mRNA cis splicing, via spliceosome | Interproscan |
| GO:0071004 | Cellular Component | U2-type prespliceosome | Interproscan |
| GO:0071013 | Cellular Component | catalytic step 2 spliceosome | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for OS493_007090-T1 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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