| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| OS493_005579-T1 | TUBULIN--TYROSINE LIGASE | scaffold_11 | 2816095 | 2832033 | - |
| CDS | |||||
| OS493_005579-T1 | |||||
| Transcript |
| OS493_005579-T1 |
| Protein |
| OS493_005579-T1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00106 | adh_short | short chain dehydrogenase | Domain | Interproscan |
| PF01549 | ShK | ShK domain-like | Domain | Interproscan |
| PF03133 | TTL | Tubulin-tyrosine ligase family | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR002347 | Family | Short-chain dehydrogenase/reductase SDR | Interproscan |
| IPR003582 | Domain | ShKT domain | Interproscan |
| IPR004344 | Family | Tubulin-tyrosine ligase/Tubulin polyglutamylase | Interproscan |
| IPR036291 | Homologous_superfamily | NAD(P)-binding domain superfamily | Interproscan |
| IPR052492 | Family | Tubulin--tyrosine ligase | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46570 | TUBULIN--TYROSINE LIGASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000226 | Biological Process | microtubule cytoskeleton organization | Interproscan |
| GO:0004835 | Molecular Function | tubulin-tyrosine ligase activity | Interproscan |
| GO:0005876 | Cellular Component | spindle microtubule | Interproscan |
| GO:0036211 | Biological Process | protein modification process | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for OS493_005579-T1 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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