Detailed information of OS493_004796-T1 in Lophelia pertusa Gene info
Gene IDAnnotationScaffoldStartEndStrand
OS493_004796-T1DNA2/NAM7 HELICASE FAMILY MEMBERscaffold_949084964918395+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13086AAA_11AAA domainDomainInterproscan
PF13087AAA_12AAA domainDomainInterproscan
PF21138SMUBP-2_HCS1_1BHelicase SMUBP-2/HCS1, 1B domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR003593DomainAAA+ ATPase domainInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR041677DomainDNA2/NAM7 helicase, helicase domainInterproscan
IPR041679DomainDNA2/NAM7 helicase-like, C-terminalInterproscan
IPR047187DomainUpf1-like, C-terminal helicase domainInterproscan
IPR048761DomainHelicase SMUBP-2/HCS1, 1B domainInterproscan
IPR050534FamilyCoronaviruses polyprotein 1abInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR43788DNA2/NAM7 HELICASE FAMILY MEMBERInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004386Molecular Functionhelicase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0043139Molecular Function5'-3' DNA helicase activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for OS493_004796-T1 global RNA-seq network
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