Detailed information of OS493_004160-T1 in Lophelia pertusa Gene info
Gene IDAnnotationScaffoldStartEndStrand
OS493_004160-T1STRUCTURE-SPECIFIC ENDONUCLEASE SUBUNIT SLX1scaffold_829110772914841+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21202SLX1_CStructure-specific endonuclease subunit SLX1, C-terminalDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR035901Homologous_superfamilyGIY-YIG endonuclease superfamilyInterproscan
IPR048749DomainStructure-specific endonuclease subunit SLX1, C-terminal domainInterproscan
IPR050381FamilySLX1 structure-specific endonucleaseInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR20208STRUCTURE-SPECIFIC ENDONUCLEASE SUBUNIT SLX1Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000724Biological Processdouble-strand break repair via homologous recombinationInterproscan
GO:0008821Molecular Functioncrossover junction DNA endonuclease activityInterproscan
GO:0017108Molecular Function5'-flap endonuclease activityInterproscan
GO:0033557Cellular ComponentSlx1-Slx4 complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for OS493_004160-T1 global RNA-seq network
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