| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| OS493_003196-T1 | NUCLEOSOME-REMODELING FACTOR SUBUNIT BPTF | scaffold_6 | 6176781 | 6182674 | - |
| CDS | |||||
| OS493_003196-T1 | |||||
| Transcript |
| OS493_003196-T1 |
| Protein |
| OS493_003196-T1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02791 | DDT | DDT domain | Family | Interproscan |
| PF15612 | WHIM1 | WSTF, HB1, Itc1p, MBD9 motif 1 | Motif | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR018501 | Domain | DDT domain | Interproscan |
| IPR028942 | Domain | WHIM1 domain | Interproscan |
| IPR038028 | Family | Nucleosome-remodeling factor subunit BPTF | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45975 | NUCLEOSOME-REMODELING FACTOR SUBUNIT BPTF | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000978 | Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | Interproscan |
| GO:0006357 | Biological Process | regulation of transcription by RNA polymerase II | Interproscan |
| GO:0016589 | Cellular Component | NURF complex | Interproscan |
| GO:0035064 | Molecular Function | methylated histone binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for OS493_003196-T1 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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