Detailed information of OS493_001271-T1 in Lophelia pertusa Gene info
Gene IDAnnotationScaffoldStartEndStrand
OS493_001271-T1ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 2scaffold_273121167312934+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
--

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF135322OG-FeII_Oxy_22OG-Fe(II) oxygenase superfamilyDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR005123DomainOxoglutarate/iron-dependent dioxygenaseInterproscan
IPR027450DomainAlpha-ketoglutarate-dependent dioxygenase AlkB-likeInterproscan
IPR032852FamilyDNA oxidative demethylase ALKBH2Interproscan
IPR037151Homologous_superfamilyAlpha-ketoglutarate-dependent dioxygenase AlkB-like superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR31573ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 2Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0006281Biological ProcessDNA repairInterproscan
GO:0006307Biological ProcessDNA alkylation repairInterproscan
GO:0008198Molecular Functionferrous iron bindingInterproscan
GO:0035511Biological Processobsolete oxidative DNA demethylationInterproscan
GO:0043734Molecular Functionobsolete DNA-N1-methyladenine dioxygenase activityInterproscan
GO:0051747Molecular Functioncytosine C-5 DNA demethylase activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

Expression pattern
 1. Expression trend for OS493_001271-T1 global RNA-seq network
TOP