| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| OS493_000209-T1 | 30S/40S RIBOSOMAL PROTEIN S4 | scaffold_1 | 2317071 | 2322067 | - |
| CDS | |||||
| OS493_000209-T1 | |||||
| Transcript |
| OS493_000209-T1 |
| Protein |
| OS493_000209-T1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00467 | KOW | KOW motif | Family | Interproscan |
| PF00900 | Ribosomal_S4e | Ribosomal family S4e | Family | Interproscan |
| PF01479 | S4 | S4 domain | Domain | Interproscan |
| PF08071 | RS4NT | RS4NT (NUC023) domain | Domain | Interproscan |
| PF16121 | 40S_S4_C | 40S ribosomal protein S4 C-terminus | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000876 | Family | Small ribosomal subunit protein eS4 | Interproscan |
| IPR002942 | Domain | RNA-binding S4 domain | Interproscan |
| IPR005824 | Domain | KOW | Interproscan |
| IPR013843 | Domain | Small ribosomal subunit protein eS4, N-terminal | Interproscan |
| IPR013845 | Domain | Small ribosomal subunit protein eS4, central region | Interproscan |
| IPR014722 | Homologous_superfamily | Large ribosomal subunit protein uL2, domain 2 | Interproscan |
| IPR018199 | Conserved_site | Small ribosomal subunit protein eS4, N-terminal, conserved site | Interproscan |
| IPR032277 | Domain | Small ribosomal subunit protein eS4, C-terminal domain | Interproscan |
| IPR036986 | Homologous_superfamily | RNA-binding S4 domain superfamily | Interproscan |
| IPR038237 | Homologous_superfamily | Small ribosomal subunit protein eS4, central domain superfamily | Interproscan |
| IPR041982 | Domain | Small ribosomal subunit protein eS4, KOW domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11581 | 30S/40S RIBOSOMAL PROTEIN S4 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0003735 | Molecular Function | structural constituent of ribosome | Interproscan |
| GO:0005840 | Cellular Component | ribosome | Interproscan |
| GO:0006412 | Biological Process | translation | Interproscan |
| GO:0022627 | Cellular Component | cytosolic small ribosomal subunit | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for OS493_000209-T1 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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