Gene detail

Detailed information of OFRAG00000017458.1 in Osedax frankpressi Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
OFRAG00000017458.1	AAA DOMAIN-CONTAINING	tig00097979	119538	137622	-

Gene Structure

More details in Jbrowse Sequence

CDS

OFRAG00000017458.1

ATGAGTAGTTTATTATCTCCCGAGCGAATAACAATCGGAGTTCTCGCTATCCAGGGTAGTTTTGCAGAACATATTGCAATATTGCGGGCTTTGGATACTAGTGTATTACCGCGTACGAGTGTTCGAGAGGTGCGTTGTATACGAGACCTAGAGGAATGCGATGGACTTATCATTCCTGGCGGAGAGTCGACAGTTATTACAAAATGGCTTATAAAGAATAATACTAAAGTAAGGAAGTGGTACAAAGGCGACGGCATTGGGTGTCTTCCCATCATATGGGGAACATGCGCTGGTTTAATAATACTAGCGACACACGATCACGTGGGAAAAGCACTGACCTATACCCTGGGAGGACTTGATATCGGAGTAAAACGAAACTATTATGGCGGGCAAGTGGATTCATTCGAACGTAACGTGTCGTTGTGTTCCATTGATGGTACACTAGATGGAGAGATGCATGGAATATTCATCCGAGCACCCAGCATTATCTACACTAATAATTCAACTGTGAAAACACTTGCTCATATTGTGGATAATAATAAACATACAAGAGTGGTTGCAGTAGAAAACAAGCATTTGATGGCATGCACATTTCATCCAGAATTAACAAACGATACAAGATTACATGAATATTTTTTAAGAAAGCTTCAGGTCAATTTATTTACTAAATATAGCATGAGGGCAAAACAAAATGAAAATGGTCTTGATGTCATATTAAGTAAATTACAAAAAGAAGCATATCGAGTAATATCTTTAGCATTAGAAATAGAAGAACAATATAAAAACAATTCAACTGAGATACCAGAAGACAGTCGCAATCATGCTCTTAAGAATTATAATTTGGGAGTTGGCATCTTAAATAGTGCTATGAAATTGTCTTTAAGTGGAGTAGGTGAGAACTGGGATCGGGCTCGAACTTTGCAATCCAAGATGGCAACTAACCTCAAAATGGCCAAGGAGAGAATTGCCATACTAAGTTTAAACACAGGAATAGAAACCATTAAATTAAATGGTTTGGAAATGCCGCCTTTATCAAAAGTAAAAGGAATGCCTCGAGGAGCTAGAGAACCTGCTTTCATTCCTAAAAATTACCAAAGTAATCGCCGAGTGAAAACATCTAATAATAAGTCAAAACAGTCTACGAAGATGTCAACTATTAAAAGCAGCGAGAGAACAAAAAATGTCAAAATCAGCACTTCCATTGGTTCATTACCTACACCGCCTAAAATCGCTGCAACACCCACAGTGGACAGTACCACCTCACTTCATCGTGTCAAGTCACTTAAAGGTGTAGACAATGCAATGGCTAAGCTTATCCTCGATGAAATTATTGAAGACGATACGGAAATTTCCTTTCACGATGTCGTTGGAAATGACGTTGCTAAAAGAGCTCTTCAGGAAACTGTGATTCTCCCAACTCTTCGCCCAGAACTCTTCACAGGTCTTAGAAGCCCGAGTCGAGGAATTCTTTTATTTGGACCTCCTGGAAATGGAAAAACAATGCTAGCAAAAGCTGTATCAAGGGAGAGTAAAGCTACATTCTTTAACATTAGTGCATCCTCTTTGACCTCAAAATACCTTGGTGAGAGTGAGAAATTGATTAAAGCCTTATTTGCTATTGCACACCATCTACAACCTTCTATTATCTTCTTTGATGAGATTGACTCACTTTTGAGTAAAAGATCAGAAAATGAACACGAATCCAGTCGAAGAATTAAAACAGAATTCATGTTACAATTTGATGGGCTGAAGACCAAATCTGATGAATATCGTGTCTTAGTTATGGGATGTACAAATCGGCCCTTTGAACTTGACACAGCTGTGCTAAGACGGTTCCCGAAAAGAATTTTGATCTCAAATCCCGACTTTGAAAGTCGTTGTCTTCTGGTGCAAAACTTGCTCTCGAATGAAAAAAACAATTTGAATTTATGCGACTTCAAGAAATTGGCTTACGAGACAGAGGGATATTCTTACAGCGATTTGTCAGCATTGGTAAGAGACTCCGCCCTTGCTCCAATTCGTGAATTAAACAGCGATCAGCTCCGTATTATCCCTGAATCTAAGATGAGAGGTATAACATACGATGATCTTAATGCTTCACTAAATTCTATCCGAGGTAGTATCACATCCGAGAACATGAAGGCATTCCATGACTGGAATAGCATGTATGGAGATTGTAAATAA

Transcript

OFRAG00000017458.1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00004	AAA	ATPase family associated with various cellular activities (AAA)	Domain	Interproscan
PF01174	SNO	SNO glutamine amidotransferase family	Domain	Interproscan
PF17862	AAA_lid_3	AAA+ lid domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002161	Family	Pyridoxal 5'-phosphate synthase subunit PdxT/SNO	Interproscan
IPR003593	Domain	AAA+ ATPase domain	Interproscan
IPR003959	Domain	ATPase, AAA-type, core	Interproscan
IPR003960	Conserved_site	ATPase, AAA-type, conserved site	Interproscan
IPR021196	Conserved_site	PdxT/SNO family, conserved site	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR029062	Homologous_superfamily	Class I glutamine amidotransferase-like	Interproscan
IPR041569	Domain	AAA ATPase, AAA+ lid domain	Interproscan
IPR050304	Family	Microtubule-severing AAA ATPase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23074	AAA DOMAIN-CONTAINING	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004359	Molecular Function	glutaminase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0015630	Cellular Component	microtubule cytoskeleton	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0042819	Biological Process	vitamin B6 biosynthetic process	Interproscan
GO:0042823	Biological Process	pyridoxal phosphate biosynthetic process	Interproscan
GO:0140603	Molecular Function	obsolete ATP hydrolysis activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-