Gene detail

Detailed information of OFRAG00000014947.1 in Osedax frankpressi Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
OFRAG00000014947.1	VERY KIND PROTEIN	tig00006442	1330	26837	+

Gene Structure

More details in Jbrowse Sequence

CDS

OFRAG00000014947.1

ATGACAGAAGTTGATATAATAAGAAGTTTATCTTTACCAAATGTTTATTTTAACGAAGAAACTCTTATTAAAAAGATCGACACCGCTTGCAGTATTGAGAATGAAATTACTTCATTAAAATTTACTTCATTAGAACTGACTTCATTAAAAAATGACATTCTAATTTCAAGTGATCAAGTAGAATATGATAATGCTGATAATGTATTAGAAAATTCTGCACAAGAAGAATATTTATTAGATAAAACGATATTAGAAATATATGAGTCTGGGAGCTATAATTCATTATTGGTGAGTGCTTCCGATACAGATGCAACAGGAGACAACTCTATAACACTGGATTCGACAATTTCAGATAAATATAACAGCTCTTCTCCTGACCCGGCCAATTATACTACACTATCAACACCCCCATTGCAAACAATTCCGATTGTCTTGTATTCACCACCTGTCAATCATCGCCGGCGCCACGCCCATTCACGAAATAGTCAAACCCCTAATATTAACGATCATTCAAACATAGATTCATCATTATATCAACCAACTCCTCAGTCCACACACATATTACAATCATTACGCAATTTTGGTCAACAACTGCCATATAAAGAAATATTTTCTAATTCCAATGATAATATGACGCTATCTTTAAATAACAAGAATTTGGATAAAAATACTTCAAAACATAAGAATTCAGGTATAGTATTATCATCAATCTTAGATACAATTTCATGTGCTTTAAGTGAAACAGAACTATGGGCTATTACTAAAGAGTGTATAAAGTACCTATCATCATTGAAAACTGAAAATTTACCTGAATATGTTTGTTTGGGAACTTTGGAAATTAAAGAAGATGGAAGTATTTATTTTAATGAAGTAAATGAACATGCAACTTTAGAATTATTTTATGTTGCTCCCGAATCTAAAATTACAGGTGAAATTAATGAGCAGACATGTATTTATGGAGTAGCAGTTATACTATTGGCAACAGCTGATTATAAAATGCCAGCCAATCAGGAACCAGCTTTATCAAAACAATTTGAGAATTTATTAATATCCATGACGCAAAATGATGCAAATTTGCGGCCTACTTTAAACGACGTCAAACAAGCCTGTGATAAATATTACTCGGAACAAGAAAGTATTGGGTCAAATTTAGTTTGTGAAATTCTCTTTAGAGATGCACAGAAAATAAAAGATTTTAACAAATCAAATCCTATCATTACAAATTTATTAAGCGATGAAGTAGAAACGGATGCCAGAGAAAACCATGCTTTAGTGATAGATAGTATTAAAAATAAAGATCATTTATTAAAACCTGTTGATTGTCGTGTACTATCTGAAAGAGTCATTGAAAAGTCTATTCATGAATTACTAATGGAAGAAATAAGAAATTCTAGATTCTTTCTTAAAAAGTGTCGTCAACCAAGATTATTAAAGATTAATGCGATGTATCGTTCTGACAAACATCTTATGAAGTCTTTAATCAATGTAACAAAACCAAATACTAAGGTTTATCAGACTCCTCCATTTGAAAGAAAGACAGTTAAAAGTCAATTTAGAAATTCTGAATCTTATTCATCTTCTTCATGCGAGGATGAAATAAACATAGCTCCTTCATCTTTGCAAGTGCAATTGACACGAGATCAAAATACTGGCCTTTATTCTATTCTTCCTTTTGATCTTCACTTAGATTCCAAACGATTTTCGCATACTGTAAAAAGAAGACGTTCTAGGGGTTTACAAAGAACTCAATCACAGAATATGAATCGATCTCAAAGTACTTCATTCTGTAACAATTATATTTCTTTAATGTCCTCAAATCCAAATCTTAACTCACATCCTTTATCTACAACAAGTTCAGATATTTATGATTGTAAACCATTTTCAAATAGATCTAAGCTAGAATCGATCAACTCTCCCCCATCTCCATCATGGAGTAAAGATAGTGGAATATCTGGAATAAAGAATGCTGCTATGATGGCATCAGCTCCTTCAATTGATGCTCAGTCATATTCTACTTTCACATGTAACCAGCAACCTCATCTTCAGATTGGAGATTCTGCTCAGAGGATGAGAGAAAATGAATCACAAATTATCAATCTTCTAAGAAGAAATTTGCCTTTAAATAGATTTGATTCTCATTTGGGAGAAATAGATGAAAATAGCATGGCTGAATATATACTATCGCTCGCCGGTCTAAAATGGTTGACTTTCATGCATGCAATGTCTGAGAAATTTACACACTTATATTTCACTGAGCACTTCTTAATTTCACTTTATGAAACCATTAATAATAGAATTCAAAATAATTTTATAAATAGTGATATTATAAGAAGAGTGAAAAGAAGTAAAGCAGAGATTGATTCTCATTGGTCAAGTTCTGCAAGTAGTTCAAGTTCTCCAGCCCCTCCTCACCAAATTAATTATAATACTAGTCCACCTCTGGATAGGACAGTTACCACATTAAATTCTCAATATTCGACAGACAGTGCATTTACTCCTATAAATAAATATAATACCAATCTTACGGTTCTTGATTATAAGCCACGTCCAGTTAGTGTTCATTCTCCCTTGTACGGAACAAGGCAAGAGCAAATTATACAACCAACAAAACTTCATGGTGCGAGTACCATGAATCTTTCTTCTTCAAATCATCAAGTCACTTCTAACTTATGTCGCTCTTATTCGCAGATGCTTACAAAGGAAGGAATCAATGTACGGTCATCAATACGTAGACGGGAAGCAAGAAATAATTCTGACTTCCCAACAAACACTATACGACCTATTTCAATTTGTACAAATTCAAAAAAAGTTGATAATCAGCCAAGATTACCAACTAATGGAAGGGTTATTTATTACCATGCCGAGATGTTAATGTCACGTAAATCTGCACCAATCAGTCCTGATCTTTTATTAAAAAGAATATCCAAACCTCAAGACATTGAAACTCATGGATTAATAGAAAAAAAACTAAAAGAAATTATTCAACATCTTTCAATCGAACAGAAGAATCGTAGAAAAACACATAGGTATTATAACAAACTTCTGGAAATGACCAAACAAAGAAAAGTTGGAAATGAGCAAAAGATTCTTTTGAGCAATGTCAGTCGTCAGCTTAATGAAACTAATGAAAAGCTTTTTTATTTGGAAGCAAGTAAAAAACATTTGGAAATGGTACATGCTGAATATTGGTCAATTCCAAAAGAATTACTTGGCTCTTTAATTAATACAAGAGAAGACCAAGCTTTACATTTGTTTGCCTCCGATGACCATTATCGTTATTTTGTTTTTGAAAATGATGAAAGTAATCCATCATCTTTACAAGCTGCTACTCCAGTTGCATTAATGGCATATCTATTTGCAAGATCAGCATTATCTGAAGGATACATTCATAAATTCTTTTTTGTCTACCGTTACTTATTGACTCCATCGCAATTGTTACATTTTTTAATTACAAGATATTGCTCTGCAGAACAAAGTTCAAACTATGAACATAATGATATCTGTATTAGAGTCAAGGTTAGAGTATTAACACTTTTACAAGTCTGGATTGAAAGTTATTTCAGTATTGATTTTAAAGACAATTTCAATTTATCTGCAACTTTGAAGTGTTTTCTGAGACAACATCAGGTCAAAGATAATAGAGAGAGTCTTTTACAACTTTTTGAACGATGTGAAAGTAAAGTAAACAATAATTTGTATACAAAAACACAAAGTGGAAAAAGCCTAGATAATAATAATTCAATGCCTGGAATTATTTCAAATAATTCTAGTTTATTAGAATCAAATTGGGAGTATAAATCTTTTACTCTAAGCAATTATAGTGCACATGATTTGGCAAAAGAAATTCTCTACTCTCATCAGAATTTATTTCAATATCTTCACCCTGTTAATTTTCTCGGAACTGAAAACCGTGGATTTAAAATTATTGATGATATCGTTGTTACAGATAATACCAGAAACAGAAATCAAAAAGATGATGTTTTAAAATTAATTATAGAACATGATAGAAAGATTTCTTATTGGGTGTCGATACAAATTATTTGTTGTGAAACTTCAAAGGAGCAGGTACAGACAATTATAAAGTTTATACATACAGCCAGAATTTCTAGTGAGTTGAGAAATTTTGCTGGTTGCCTTTCAATTTTATATGGATTATATAATATTGTTATTAGACAATTGCCAGCTTGGCGAAATTTACCTTCAAAAGTGAAATCACTTTATGAGAATTTGATTTCACTCTCTAATTTATTAAGAAATGATGTTATGCTTTTAATAAAAGATGACGAAACAAAAAATAGATCAACTATTCCATGTTGCAATATATTTATTCAGCAGATTCAGAATTTGGAAAATGATACTCTTTTACTCGTGAGTGGCATGTCCGATTGGAGTAAATTATGCGTCATAAGTAATGCAATTGACCAAATAAGACATTTTCAATTGAGACCTTATAATATATCGTCAACATGTGAAAATCTTTGGAAAAATGTGAATCATGCCTCGACTCTCGACCTCATTTCAATTGCTTCGAAGAACAAAGGAAATGTTCCAAAAATATCTTCTTCTAGAACATTTTTACAACGCATCCGCAGTAAATTCTCTTGA

Transcript

OFRAG00000014947.1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00617	RasGEF	RasGEF domain	Family	Interproscan
PF00618	RasGEF_N	RasGEF N-terminal motif	Domain	Interproscan
PF16474	KIND	Kinase non-catalytic C-lobe domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000651	Domain	Ras-like guanine nucleotide exchange factor, N-terminal	Interproscan
IPR001895	Domain	Ras guanine-nucleotide exchange factors catalytic domain	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR011019	Domain	KIND domain	Interproscan
IPR023578	Homologous_superfamily	Ras guanine nucleotide exchange factor domain superfamily	Interproscan
IPR029899	Family	Kinase non-catalytic C-lobe domain-containing protein 1	Interproscan
IPR036964	Homologous_superfamily	Ras guanine-nucleotide exchange factor, catalytic domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21560	VERY KIND PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005085	Molecular Function	guanyl-nucleotide exchange factor activity	Interproscan
GO:0007264	Biological Process	small GTPase-mediated signal transduction	Interproscan
GO:0030425	Cellular Component	dendrite	Interproscan
GO:0032045	Cellular Component	guanyl-nucleotide exchange factor complex	Interproscan
GO:0043025	Cellular Component	neuronal cell body	Interproscan
GO:0048814	Biological Process	regulation of dendrite morphogenesis	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-